1. 2016
  2. Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050T (DSM 19838T) and Gramella portivictoriae UST040801-001T (DSM 23547T), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005

    Panschin, I., Huang, S., Meier-Kolthoff, J. P., Tindall, B. J., Rohde, M., Verbarg, S., Lapidus, A., Han, J., Trong, S., Haynes, M., Reddy, T. B. K., Huntemann, M., Pati, A., Ivanova, N. N., Mavromatis, K., Markowitz, V., Woyke, T., Göker, M., Klenk, H. P., Kyrpides, N. C. & 1 others, Hahnke, R. L., 3 Jun 2016, In: Standards in Genomic Sciences. 11, 1, 37.

    Research output: Contribution to journalArticlepeer-review

  3. Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles

    Castanera, R., Lopez-Varas, L., Borgognone, A., LaButti, K., Lapidus, A., Schmutz, J., Grimwood, J., Perez, G., Pisabarro, A. G., Grigoriev, I. V., Stajich, J. E. & Ramirez, L., 1 Jun 2016, In: PLoS Genetics. 12, 6, 27 p., e1006108.

    Research output: Contribution to journalArticlepeer-review

  4. Fungi contribute critical but spatially varying roles in nitrogen and carbon cycling in acid mine drainage

    Mosier, A. C., Miller, C. S., Frischkorn, K. R., Ohm, R. A., Li, Z., LaButti, K., Lapidus, A., Lipzen, A., Chen, C., Johnson, J., Lindquist, E. A., Pan, C., Hettich, R. L., Grigoriev, I. V., Singer, S. W. & Banfield, J. F., 3 Mar 2016, (E-pub ahead of print) In: Frontiers in Microbiology. 7, 18 p.

    Research output: Contribution to journalArticlepeer-review

  5. Complete genome sequence of Methanospirillum hungatei type strain JF1

    Gunsalus, R. P., Cook, L. E., Crable, B., Rohlin, L., McDonald, E., Mouttaki, H., Sieber, J. R., Poweleit, N., Zhou, H., Lapidus, A. L., Daligault, H. E., Land, M., Gilna, P., Ivanova, N., Kyrpides, N., Culley, D. E. & McInerney, M. J., 6 Jan 2016, In: Standards in Genomic Sciences. 11, 1, 2.

    Research output: Contribution to journalArticlepeer-review

  6. Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds

    Hwang, C., Copeland, A., Lucas, S., Лапидус, А., Barry, K., Detter, J. C., Glavina Del Rio, T., Hammon, N., Israni, S., Dalin, E., Tice, H., Pitluck, S., Chertkov, O., Brettin, T., Bruce, D., Han, C., Schmutz, J., Larimer, F., Land, M. L., Hauser, L. & 5 others, Kyrpides, N., Ye, Q., Zhou, J., Richardson, P. & Fields, M. W., 2016, In: Genome Announcements. 4, 6

    Research output: Contribution to journalArticlepeer-review

  7. Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2(T), a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes

    Melton, E. D., Sorokin, D. Y., Overmars, L., Chertkov, O., Clum, A., Pillay, M., Ivanova, N., Shapiro, N., Kyrpides, N. C., Woyke, T., Lapidus, A. L. & Muyzer, G., 2016, In: Standards in Genomic Sciences. 11, 9 p.

    Research output: Contribution to journalArticlepeer-review

  8. Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T))

    Kappler, U., Davenport, K., Beatson, S., Lapidus, A., Pan, C., Han, C., Montero-Calasanz, M. D. C., Land, M., Hauser, L., Rohde, M., Göker, M., Ivanova, N., Woyke, T., Klenk, H-P. & Kyrpides, N. C., 2016, In: Standards in Genomic Sciences. 11, 12 p., 38.

    Research output: Contribution to journalArticlepeer-review

  9. High-quality draft genome sequence of Flavobacterium suncheonense GH29-5(T) (DSM 17707(T)) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5(T)

    Tashkandy, N., Sabban, S., Fakieh, M., Meier-Kolthoff, J. P., Huang, S., Tindall, B. J., Rohde, M., Baeshen, M. N., Baeshen, N. A., Lapidus, A., Copeland, A., Pillay, M., Reddy, T. B. K., Huntemann, M., Pati, A., Ivanova, N., Markowitz, V., Woyke, T., Goeker, M., Klenk, H-P. & 2 others, Kyrpides, N. C. & Hahnke, R. L., 2016, In: Standards in Genomic Sciences. 11, 10 p.

    Research output: Contribution to journalArticlepeer-review

  10. High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods

    Aizenberg-Gershtein, Y., Izhaki, I., Lapidus, A., Copeland, A., Reddy, T. B. K., Huntemann, M., Pillay, M., Markowitz, V., Goeker, M., Woyke, T., Klenk, H-P., Kyrpides, N. C. & Halpern, M., 2016, In: Standards in Genomic Sciences. 11, 7 p.

    Research output: Contribution to journalArticlepeer-review

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