1. 2019
  2. Draft Genome Sequence of Mn(II)-Oxidizing Bacterium Oxalobacteraceae sp. Strain AB_14

    Bushman, T. J., Akob, D. M., Bohu, T., Beyer, A., Woyke, T., Shapiro, N., Lapidus, A., Klenk, H-P. & Kuesel, K., 24 Oct 2019, In: Microbiology Resource Announcements. 8, 43, e01024-19.

    Research output: Contribution to journalArticlepeer-review

  3. RnaSPAdes: A de novo transcriptome assembler and its application to RNA-Seq data

    Bushmanova, E., Antipov, D., Lapidus, A. & Prjibelski, A. D., 18 Sep 2019, In: GigaScience. 8, 9, 13 p., giz100.

    Research output: Contribution to journalArticlepeer-review

  4. IonHammer: Homopolymer-Space Hamming Clustering for IonTorrent Read Error Correction

    Ershov, V., Тарасов, А., Lapidus, A. & Korobeynikov, A., 1 Feb 2019, In: Journal of Computational Biology. 26, 2, p. 124-127 4 p.

    Research output: Contribution to journalArticlepeer-review

  5. Genome sequence databases: Sequencing and assembly

    Lapidus, A. L., 1 Jan 2019, Sequence Databases: Sequencing and Assembly. : Reference Module in Biomedical Sciences Encyclopedia of Microbiology. Fourth Edition ed. Elsevier, p. 400-418 19 p. (Encyclopedia of Microbiology).

    Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionarypeer-review

  6. Plasmid detection and assembly in genomic and metagenomic datasets

    Antipov, D., Raiko, M., Lapidus, A. & Pevzner, P. A., 1 Jan 2019, In: Genome Research. 29, 6, p. 961-968 8 p.

    Research output: Contribution to journalArticlepeer-review

  7. Sequence Analysis

    Пржибельский, А. Д., Коробейников, А. И. & Лапидус, А. Л., 2019, Reference Module in Life Sciences. Elsevier, p. 292-322 31 p. (Encyclopedia of Bioinformatics and Computational Biology; vol. 3).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  8. Микробиом (микробиота) при синдроме раздраженного кишечника: пути коррекции.

    Суворов, А. Н., Соловьева, О. И., Котылева, М. П., Цапиева, А. Н., Карасева, А. Б., Кондратенко, Ю. Д., Лапидус, А. Л. & Ермоленко, Е. И., 2019, p. 111.

    Research output: Contribution to conferenceAbstract

  9. 2018
  10. Autoprobiotics as an Approach for Restoration of Personalised Microbiota

    Суворов, А. Н., Карасева, А. Б., Котылева, М. П., Кондратенко, Ю. Д., Лавренова, Н., Коробейников, А. И., Козырев, П. А., Крамская, Т. А., Леонтьева, Г., Кудрявцев, И. В., Guo, D., Лапидус, А. Л. & Ермоленко, Е. И., 12 Sep 2018, In: Frontiers in Microbiology. 9, SEP, 9 p., 1869.

    Research output: Contribution to journalArticlepeer-review

  11. Intestinal microbiota of patients with patients irritable bowel syndrome

    Ermolenko, E., Solovyeva, O., Lapidus, A., Kondratenko, Y., Kozyrev, P., Ermolenko, K., Simanenkov, V. & Suvorov, A., Sep 2018, In: Helicobacter. 23, 2 p.

    Research output: Contribution to journalMeeting Abstractpeer-review

  12. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (Nature Biotechnology (2017) 35 (725-731) DOI: 10.1038/nbt.3893)

    Bowers, R. M., Kyrpides, N. C., Stepanauskas, R., Harmon-Smith, M., Doud, D., Reddy, T. B. K., Schulz, F., Jarett, J., Rivers, A. R., Eloe-Fadrosh, E. A., Tringe, S. G., Ivanova, N. N., Copeland, A., Clum, A., Becraft, E. D., Malmstrom, R. R., Birren, B., Podar, M., Bork, P., Weinstock, G. M. & 30 others, Garrity, G. M., Dodsworth, J. A., Yooseph, S., Sutton, G., Glöckner, F. O., Gilbert, J. A., Nelson, W. C., Hallam, S. J., Jungbluth, S. P., Ettema, T. J. G., Tighe, S., Konstantinidis, K. T., Liu, W. T., Baker, B. J., Rattei, T., Eisen, J. A., Hedlund, B., Mcmahon, K. D., Fierer, N., Knight, R., Finn, R., Cochrane, G., Karsch-Mizrachi, I., Tyson, G. W., Rinke, C., Lapidus, A., Meyer, F., Yilmaz, P., Parks, D. H. & Eren, A. M., 6 Jul 2018, In: Nature Biotechnology. 36, 7, p. 660-660 1 p.

    Research output: Contribution to journalComment/debatepeer-review

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