Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование
Transcriptomic analysis of radish (Raphanus sativus l.) spontaneous tumor. / Tkachenko, Alexander; Dodueva, Irina; Tvorogova, Varvara; Predeus, Alexander; Pravdina, Olga; Kuznetsova, Ksenia; Lutova, Ludmila.
в: Plants, Том 10, № 5, 919, 05.2021.Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование
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TY - JOUR
T1 - Transcriptomic analysis of radish (Raphanus sativus l.) spontaneous tumor
AU - Tkachenko, Alexander
AU - Dodueva, Irina
AU - Tvorogova, Varvara
AU - Predeus, Alexander
AU - Pravdina, Olga
AU - Kuznetsova, Ksenia
AU - Lutova, Ludmila
N1 - Publisher Copyright: © 2021 by the authors. Licensee MDPI, Basel, Switzerland. Copyright: Copyright 2021 Elsevier B.V., All rights reserved.
PY - 2021/5
Y1 - 2021/5
N2 - Spontaneous tumors can develop in different organs of various plant species without any pathogen infection and, as a rule, appear in plants with a certain genotype: Mutants, interspecific hybrids, etc. In particular, among the inbred lines of radish (Raphanus sativus L.), lines that form spontaneous tumors on the taproot during the flowering period were obtained many years ago. In this work, we analyzed the differential gene expression in the spontaneous tumors of radish versus the lateral roots using the RNA-seq method. Data were obtained indicating the increased expression of genes associated with cell division and growth (especially genes that regulate G2-M transition and cytokinesis) in the spontaneous tumor. Among genes downregulated in the tumor tissue, genes participating in the response to stress and wounding, mainly involved in the biosynthesis of jasmonic acid and glucosinolates, were enriched. Our data will help elucidate the mechanisms of spontaneous tumor development in higher plants.
AB - Spontaneous tumors can develop in different organs of various plant species without any pathogen infection and, as a rule, appear in plants with a certain genotype: Mutants, interspecific hybrids, etc. In particular, among the inbred lines of radish (Raphanus sativus L.), lines that form spontaneous tumors on the taproot during the flowering period were obtained many years ago. In this work, we analyzed the differential gene expression in the spontaneous tumors of radish versus the lateral roots using the RNA-seq method. Data were obtained indicating the increased expression of genes associated with cell division and growth (especially genes that regulate G2-M transition and cytokinesis) in the spontaneous tumor. Among genes downregulated in the tumor tissue, genes participating in the response to stress and wounding, mainly involved in the biosynthesis of jasmonic acid and glucosinolates, were enriched. Our data will help elucidate the mechanisms of spontaneous tumor development in higher plants.
KW - Cell division
KW - Differential gene expression
KW - Raphanus sativus
KW - RNA-seq
KW - Spontaneous tumor
KW - Stress response
KW - ANALYSIS REVEALS
KW - RESPONSE REGULATORS
KW - INBRED LINES
KW - cell division
KW - spontaneous tumor
KW - CIRCADIAN CLOCK
KW - differential gene expression
KW - IN-VITRO
KW - stress response
KW - CELL PLATE FORMATION
KW - GLUCOSINOLATE BIOSYNTHESIS
KW - LATERAL ROOT-FORMATION
KW - CYCLIN-DEPENDENT-KINASES
KW - JASMONIC ACID
UR - http://www.scopus.com/inward/record.url?scp=85105015927&partnerID=8YFLogxK
U2 - 10.3390/plants10050919
DO - 10.3390/plants10050919
M3 - Article
AN - SCOPUS:85105015927
VL - 10
JO - Plants
JF - Plants
SN - 2223-7747
IS - 5
M1 - 919
ER -
ID: 76837844