Standard

Complete genome sequence of oceanithermus profundus type strain (506 T). / Pati, Amrita; Zhang, Xiaojing; Lapidus, Alla; Nolan, Matt; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Hauser, Loren; Jeffries, Cynthia D.; Brambilla, Evelyne Marie; Röhl, Alina; Mwirichia, Romano; Rohde, Manfred; Tindall, Brian J.; Sikorski, Johannes; Wirth, Reinhard; Göker, Markus; Woyke, Tanja; Detter, John C.; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Land, Miriam.

в: Standards in Genomic Sciences, Том 4, № 2, 11.10.2011, стр. 210-220.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Pati, A, Zhang, X, Lapidus, A, Nolan, M, Lucas, S, del Rio, TG, Tice, H, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Mavromatis, K, Chen, A, Palaniappan, K, Hauser, L, Jeffries, CD, Brambilla, EM, Röhl, A, Mwirichia, R, Rohde, M, Tindall, BJ, Sikorski, J, Wirth, R, Göker, M, Woyke, T, Detter, JC, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Land, M 2011, 'Complete genome sequence of oceanithermus profundus type strain (506 T)', Standards in Genomic Sciences, Том. 4, № 2, стр. 210-220. https://doi.org/10.4056/sigs.1734292

APA

Pati, A., Zhang, X., Lapidus, A., Nolan, M., Lucas, S., del Rio, T. G., Tice, H., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Mavromatis, K., Chen, A., Palaniappan, K., Hauser, L., Jeffries, C. D., ... Land, M. (2011). Complete genome sequence of oceanithermus profundus type strain (506 T). Standards in Genomic Sciences, 4(2), 210-220. https://doi.org/10.4056/sigs.1734292

Vancouver

Pati A, Zhang X, Lapidus A, Nolan M, Lucas S, del Rio TG и пр. Complete genome sequence of oceanithermus profundus type strain (506 T). Standards in Genomic Sciences. 2011 Окт. 11;4(2):210-220. https://doi.org/10.4056/sigs.1734292

Author

Pati, Amrita ; Zhang, Xiaojing ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Cheng, Jan Fang ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Hauser, Loren ; Jeffries, Cynthia D. ; Brambilla, Evelyne Marie ; Röhl, Alina ; Mwirichia, Romano ; Rohde, Manfred ; Tindall, Brian J. ; Sikorski, Johannes ; Wirth, Reinhard ; Göker, Markus ; Woyke, Tanja ; Detter, John C. ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Land, Miriam. / Complete genome sequence of oceanithermus profundus type strain (506 T). в: Standards in Genomic Sciences. 2011 ; Том 4, № 2. стр. 210-220.

BibTeX

@article{3b0f44f9971c4f74b854a19610d93e31,
title = "Complete genome sequence of oceanithermus profundus type strain (506 T)",
abstract = "Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Ocea-nithermus, which belongs to the family Thermaceae. The genus currently comprises two spe-cies whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbo-hydrates, some proteinaceous substrates, organic acids and alcohols. This is the first com-pleted genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Chemolithoheterotrophic, GEBA, Gram-negative, Hydrothermal vent, Microaerophilic, Moderate thermo-philic, Neutrophilic, Nitrate-reducing, Non-motile, Thermaceae",
author = "Amrita Pati and Xiaojing Zhang and Alla Lapidus and Matt Nolan and Susan Lucas and {del Rio}, {Tijana Glavina} and Hope Tice and Cheng, {Jan Fang} and Roxane Tapia and Cliff Han and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Konstantinos Mavromatis and Amy Chen and Krishna Palaniappan and Loren Hauser and Jeffries, {Cynthia D.} and Brambilla, {Evelyne Marie} and Alina R{\"o}hl and Romano Mwirichia and Manfred Rohde and Tindall, {Brian J.} and Johannes Sikorski and Reinhard Wirth and Markus G{\"o}ker and Tanja Woyke and Detter, {John C.} and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Miriam Land",
year = "2011",
month = oct,
day = "11",
doi = "10.4056/sigs.1734292",
language = "English",
volume = "4",
pages = "210--220",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "2",

}

RIS

TY - JOUR

T1 - Complete genome sequence of oceanithermus profundus type strain (506 T)

AU - Pati, Amrita

AU - Zhang, Xiaojing

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Lucas, Susan

AU - del Rio, Tijana Glavina

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Tapia, Roxane

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Pagani, Ioanna

AU - Mavromatis, Konstantinos

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Hauser, Loren

AU - Jeffries, Cynthia D.

AU - Brambilla, Evelyne Marie

AU - Röhl, Alina

AU - Mwirichia, Romano

AU - Rohde, Manfred

AU - Tindall, Brian J.

AU - Sikorski, Johannes

AU - Wirth, Reinhard

AU - Göker, Markus

AU - Woyke, Tanja

AU - Detter, John C.

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Land, Miriam

PY - 2011/10/11

Y1 - 2011/10/11

N2 - Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Ocea-nithermus, which belongs to the family Thermaceae. The genus currently comprises two spe-cies whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbo-hydrates, some proteinaceous substrates, organic acids and alcohols. This is the first com-pleted genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Ocea-nithermus, which belongs to the family Thermaceae. The genus currently comprises two spe-cies whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbo-hydrates, some proteinaceous substrates, organic acids and alcohols. This is the first com-pleted genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Chemolithoheterotrophic

KW - GEBA

KW - Gram-negative

KW - Hydrothermal vent

KW - Microaerophilic

KW - Moderate thermo-philic

KW - Neutrophilic

KW - Nitrate-reducing

KW - Non-motile

KW - Thermaceae

UR - http://www.scopus.com/inward/record.url?scp=80053514179&partnerID=8YFLogxK

U2 - 10.4056/sigs.1734292

DO - 10.4056/sigs.1734292

M3 - Article

AN - SCOPUS:80053514179

VL - 4

SP - 210

EP - 220

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 2

ER -

ID: 41823414