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  1. 2019

  2. Precision nomenclature for the new genomics

    Lewin, H. A., Graves, J. A. M., Ryder, O. A., Graphodatsky, A. S. & O'Brien, S. J., 22 Aug 2019, In: GigaScience. 8, 8, 3 p., 086.

    Research output: Contribution to journal › Editorial › peer-review

  3. The Vertebrate TLR Supergene Family Evolved Dynamically by Gene Gain/Loss and Positive Selection Revealing a Host–Pathogen Arms Race in Birds

    Khan, I., Maldonado, E., Silva, L., Almeida, D., Johnson, W. E., O’Brien, S. J., Zhang, G., Jarvis, E. D., Gilbert, M. T. P. & Antunes, A., Aug 2019, In: Diversity. 11, 8, 131.

    Research output: Contribution to journal › Article › peer-review

  4. De-escalation of tyrosine kinase inhibitor therapy before complete treatment discontinuation in patients with chronic myeloid leukaemia (DESTINY): a non-randomised, phase 2 trial

    Clark, R. E., Polydoros, F., Apperley, J. F., Milojkovic, D., Rothwell, K., Pocock, C., Byrne, J., de Lavallade, H., Osborne, W., Robinson, L., O'Brien, S. G., Read, L., Foroni, L. & Copland, M., Jul 2019, In: The Lancet Haematology. 6, 7, p. e375-e383

    Research output: Contribution to journal › Article › peer-review

  5. Whole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A resource for monitoring diversity in ex situ and in situ populations

    Koepfli, K. P., Tamazian, G., Wildt, D., Dobrynin, P., Kim, C., Frandsen, P. B., Godinho, R., Yurchenko, A. A., Komissarov, A., Krasheninnikova, K., Kliver, S., Kolchanova, S., Gonçalves, M., Carneiro, M., Pinto, P. V., Ferrand, N., Maldonado, J. E., Ferrie, G. M., Chemnick, L., Ryder, O. A. & 4 others, Johnson, W. E., Comizzoli, P., O'Brien, S. J. & Pukazhenthi, B. S., 5 Jun 2019, In: G3 (Bethesda, Md.). 9, 6, p. 1785-1793 9 p.

    Research output: Contribution to journal › Article › peer-review

  6. Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks

    Farré, M., Kim, J., Proskuryakova, A. A., Zhang, Y., Kulemzina, A. I., Li, Q., Zhou, Y., Xiong, Y., Johnson, J. L., Perelman, P. L., Johnson, W. E., Warren, W. C., Kukekova, A. V., Zhang, G., O’Brien, S. J., Ryder, O. A., Graphodatsky, A. S., Ma, J., Lewin, H. A. & Larkin, D. M., Apr 2019, In: Genome Research. 29, 4, p. 576-589 14 p.

    Research output: Contribution to journal › Article › peer-review

  7. White shark genome reveals ancient elasmobranch adaptations associated with wound healing and the maintenance of genome stability

    Marra, N. J., Stanhope, M. J., Jue, N. K., Wang, M., Sun, Q., Bitar, P. P., Richards, V. P., Komissarov, A., Rayko, M., Kliver, S., Stanhope, B. J., Winkler, C., O’Brien, S. J., Antunes, A., Jorgensen, S. & Shivji, M. S., 5 Mar 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 10, p. 4446-4455 10 p.

    Research output: Contribution to journal › Article › peer-review

  8. Integrated analysis of competing endogenous RNA network revealing potential prognostic biomarkers of hepatocellular carcinoma

    Liao, X., Wang, X., Huang, K., Han, C., Deng, J., Yu, T., Yang, C., Huang, R., Liu, X., Yu, L., Zhu, G., Su, H., Qin, W., Zeng, X., Han, B., Han, Q., Liu, Z., Zhou, X., Gong, Y., Liu, Z. & 5 others, Huang, J., Winkler, C. A., O'Brien, S. J., Ye, X. & Peng, T., 1 Jan 2019, In: Journal of Cancer. 10, 14, p. 3267-3283 17 p.

    Research output: Contribution to journal › Article › peer-review

  9. halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments

    Krasheninnikova, K., Diekhans, M., Armstrong, J., Dievskii, A., Paten, B. & O'Brien, S., 2019, In: Bioinformatics.

    Research output: Contribution to journal › Article › peer-review

  10. THE GENOME RUSSIA PROJECT-2019.

    Obrien, S. J., Zhernakova, D. V., Brukhin, V., Malov, S., Oleksyk, T. K., Dobrynin, P., Kliver, S., Cherkasov, N., Tamazian, G., Krasheninnikova, K., Evsyukov, I., Sidorov, S., Gorbunova, A., Chernyaeva, E., Shevchenko, A., Komissarov, A., Simonov, S., Antonik, A., Logachev, A., Polev, D. E. & 6 others, Glotov, A. S., Sivtseva, T. M., Balanovsky, O., Osakovsky, V., Novozhilov, A. & Puzyrev, V., 2019, p. 89.

    Research output: Contribution to conference › Abstract

  11. 2018

  12. Analytical "bake-off" of whole genome sequencing quality for the Genome Russia project using a small cohort for autoimmune hepatitis

    Zhernakova, D., Kliver, S., Cherkasov, N., Tamazian, G., Rotkevich, M., Krasheninnikova, K., Evsyukov, I., Sidorov, S., Dobrynin, P., Yurchenko, A. A., Shimansky, V., Shcherbakova, I. V., Glotov, A. S., Valle, D. L., Tang, M., Shin, E., Schwarz, K. B. & O'Brien, S. J., 11 Jul 2018, In: PLoS ONE. 13, 7, p. e0200423 18 p., e0200423.

    Research output: Contribution to journal › Article › peer-review

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