Результаты исследований: Публикации в книгах, отчётах, сборниках, трудах конференций › статья в сборнике материалов конференции › научная › Рецензирование
In the shortest common superstring problem (SCS) one is given a set s 1,..., sn of n strings and the goal is to find a shortest string containing each si as a substring. While many approximation algorithms for this problem have been developed, it is still not known whether it can be solved exactly in fewer than 2n steps. In this paper we present an algorithm that solves the special case when all of the input strings have length 3 in time 3n/3 and polynomial space. The algorithm generates a combination of a de Bruijn graph and an overlap graph, such that a SCS is then a shortest directed rural postman path (DRPP) on this graph. We show that there exists at least one optimal DRPP satisfying some natural properties. The algorithm works basically by exhaustive search, but on the reduced search space of such paths of size 3n/3.
Язык оригинала | английский |
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Название основной публикации | Mathematical Foundations of Computer Science 2013 - 38th International Symposium, MFCS 2013, Proceedings |
Страницы | 480-491 |
Число страниц | 12 |
DOI | |
Состояние | Опубликовано - 15 окт 2013 |
Событие | 38th International Symposium on Mathematical Foundations of Computer Science, MFCS 2013 - Klosterneuburg, Австрия Продолжительность: 26 авг 2013 → 30 авг 2013 |
Название | Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
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Том | 8087 LNCS |
ISSN (печатное издание) | 0302-9743 |
ISSN (электронное издание) | 1611-3349 |
конференция | 38th International Symposium on Mathematical Foundations of Computer Science, MFCS 2013 |
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Страна/Tерритория | Австрия |
Город | Klosterneuburg |
Период | 26/08/13 → 30/08/13 |
ID: 49826082