Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование
Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1). / Mavromatis, Konstantinos; Chertkov, Olga; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Tice, Hope; Del Rio, Tijana Glavina; Cheng, Jan Fang; Han, Cliff; Tapia, Roxanne; Bruce, David; Goodwin, Lynne A.; Pitluck, Sam; Huntemann, Marcel; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Brambilla, Evelyne Marie; Rohde, Manfred; Spring, Stefan; Göker, Markus; Detter, John C.; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Woyke, Tanja.
в: Standards in Genomic Sciences, Том 6, № 2, 12.07.2012, стр. 210-219.Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование
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TY - JOUR
T1 - Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)
AU - Mavromatis, Konstantinos
AU - Chertkov, Olga
AU - Lapidus, Alla
AU - Nolan, Matt
AU - Lucas, Susan
AU - Tice, Hope
AU - Del Rio, Tijana Glavina
AU - Cheng, Jan Fang
AU - Han, Cliff
AU - Tapia, Roxanne
AU - Bruce, David
AU - Goodwin, Lynne A.
AU - Pitluck, Sam
AU - Huntemann, Marcel
AU - Liolios, Konstantinos
AU - Pagani, Ioanna
AU - Ivanova, Natalia
AU - Mikhailova, Natalia
AU - Pati, Amrita
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Land, Miriam
AU - Brambilla, Evelyne Marie
AU - Rohde, Manfred
AU - Spring, Stefan
AU - Göker, Markus
AU - Detter, John C.
AU - Bristow, James
AU - Eisen, Jonathan A.
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
AU - Woyke, Tanja
PY - 2012/7/12
Y1 - 2012/7/12
N2 - Saprospira grandis Gross 1911 is a member of the Saprospiraceae, a family in the class 'Sphingobacteria' that remains poorly characterized at the genomic level. The species is known for preying on other marine bacteria via 'ixotrophy'. S. grandis strain Sa g1 was isolated from decaying crab carapace in France and was selected for genome sequencing because of its isolated location in the tree of life. Only one type strain genome has been published so far from the Saprospiraceae, while the sequence of strain Sa g1 represents the second genome to be published from a non-type strain of S. grandis. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,495,250 bp long Improved-High-Quality draft of the genome with its 3,536 pro-tein-coding and 62 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Saprospira grandis Gross 1911 is a member of the Saprospiraceae, a family in the class 'Sphingobacteria' that remains poorly characterized at the genomic level. The species is known for preying on other marine bacteria via 'ixotrophy'. S. grandis strain Sa g1 was isolated from decaying crab carapace in France and was selected for genome sequencing because of its isolated location in the tree of life. Only one type strain genome has been published so far from the Saprospiraceae, while the sequence of strain Sa g1 represents the second genome to be published from a non-type strain of S. grandis. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,495,250 bp long Improved-High-Quality draft of the genome with its 3,536 pro-tein-coding and 62 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - Chemoorganotrophic
KW - GEBA
KW - Gliding
KW - Gram-negative
KW - Ixotrophy
KW - Marine
KW - Mesophilic
KW - Saprospiraceae
KW - Strictly aerobic
UR - http://www.scopus.com/inward/record.url?scp=84863577203&partnerID=8YFLogxK
U2 - 10.4056/sigs.2816096
DO - 10.4056/sigs.2816096
M3 - Article
AN - SCOPUS:84863577203
VL - 6
SP - 210
EP - 219
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 2
ER -
ID: 36057640