Context. In atmospheres of magnetic main-sequence stars, the diffusion of chemical elements leads to a number of observed anomalies, such as abundance spots across the stellar surface. Aims: The aim of this study was to derive a detailed picture of the surface abundance distribution of the magnetic chemically peculiar star HD 3980. Methods: Based on high-resolution, phase-resolved spectroscopic observations of the magnetic A-type star HD 3980, the inhomogeneous surface distribution of 13 chemical elements (Li, O, Si, Ca, Cr, Mn, Fe, La, Ce, Pr, Nd, Eu, and Gd) has been reconstructed. The INVERS12 code was used to invert the rotational variability in line profiles to elemental surface distributions. Results: Assuming a centered, dominantly dipolar magnetic field configuration, we find that Li, O, Mg, Pr, and Nd are mainly concentrated in the area of the magnetic poles and depleted in the regions around the magnetic equator. The high abundance spots of Si, La, Ce, Eu, and Gd are located between the magnetic