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Icarus : Visualizer for de novo assembly evaluation. / Mikheenko, Alla; Valin, Gleb; Prjibelski, Andrey; Saveliev, Vladislav; Gurevich, Alexey.

в: Bioinformatics, Том 32, № 21, 01.11.2016, стр. 3321-3323.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Mikheenko, A, Valin, G, Prjibelski, A, Saveliev, V & Gurevich, A 2016, 'Icarus: Visualizer for de novo assembly evaluation', Bioinformatics, Том. 32, № 21, стр. 3321-3323. https://doi.org/10.1093/bioinformatics/btw379, https://doi.org/10.1093/bioinformatics/btw379

APA

Mikheenko, A., Valin, G., Prjibelski, A., Saveliev, V., & Gurevich, A. (2016). Icarus: Visualizer for de novo assembly evaluation. Bioinformatics, 32(21), 3321-3323. https://doi.org/10.1093/bioinformatics/btw379, https://doi.org/10.1093/bioinformatics/btw379

Vancouver

Mikheenko A, Valin G, Prjibelski A, Saveliev V, Gurevich A. Icarus: Visualizer for de novo assembly evaluation. Bioinformatics. 2016 Нояб. 1;32(21):3321-3323. https://doi.org/10.1093/bioinformatics/btw379, https://doi.org/10.1093/bioinformatics/btw379

Author

Mikheenko, Alla ; Valin, Gleb ; Prjibelski, Andrey ; Saveliev, Vladislav ; Gurevich, Alexey. / Icarus : Visualizer for de novo assembly evaluation. в: Bioinformatics. 2016 ; Том 32, № 21. стр. 3321-3323.

BibTeX

@article{e2bc3dd4278549a38248219d8122214f,
title = "Icarus: Visualizer for de novo assembly evaluation",
abstract = "Summary: Data visualization plays an increasingly important role in NGS data analysis. With advances in both sequencing and computational technologies, it has become a new bottleneck in genomics studies. Indeed, evaluation of de novo genome assemblies is one of the areas that can benefit from the visualization. However, even though multiple quality assessment methods are now available, existing visualization tools are hardly suitable for this purpose. Here, we present Icarus - a novel genome visualizer for accurate assessment and analysis of genomic draft assemblies, which is based on the tool QUAST. Icarus can be used in studies where a related reference genome is available, as well as for non-model organisms. The tool is available online and as a standalone application.",
author = "Alla Mikheenko and Gleb Valin and Andrey Prjibelski and Vladislav Saveliev and Alexey Gurevich",
note = "Publisher Copyright: {\textcopyright} The Author 2016. Published by Oxford University Press. All rights reserved. Copyright: Copyright 2016 Elsevier B.V., All rights reserved.",
year = "2016",
month = nov,
day = "1",
doi = "10.1093/bioinformatics/btw379",
language = "English",
volume = "32",
pages = "3321--3323",
journal = "Bioinformatics",
issn = "1367-4803",
publisher = "Oxford University Press",
number = "21",

}

RIS

TY - JOUR

T1 - Icarus

T2 - Visualizer for de novo assembly evaluation

AU - Mikheenko, Alla

AU - Valin, Gleb

AU - Prjibelski, Andrey

AU - Saveliev, Vladislav

AU - Gurevich, Alexey

N1 - Publisher Copyright: © The Author 2016. Published by Oxford University Press. All rights reserved. Copyright: Copyright 2016 Elsevier B.V., All rights reserved.

PY - 2016/11/1

Y1 - 2016/11/1

N2 - Summary: Data visualization plays an increasingly important role in NGS data analysis. With advances in both sequencing and computational technologies, it has become a new bottleneck in genomics studies. Indeed, evaluation of de novo genome assemblies is one of the areas that can benefit from the visualization. However, even though multiple quality assessment methods are now available, existing visualization tools are hardly suitable for this purpose. Here, we present Icarus - a novel genome visualizer for accurate assessment and analysis of genomic draft assemblies, which is based on the tool QUAST. Icarus can be used in studies where a related reference genome is available, as well as for non-model organisms. The tool is available online and as a standalone application.

AB - Summary: Data visualization plays an increasingly important role in NGS data analysis. With advances in both sequencing and computational technologies, it has become a new bottleneck in genomics studies. Indeed, evaluation of de novo genome assemblies is one of the areas that can benefit from the visualization. However, even though multiple quality assessment methods are now available, existing visualization tools are hardly suitable for this purpose. Here, we present Icarus - a novel genome visualizer for accurate assessment and analysis of genomic draft assemblies, which is based on the tool QUAST. Icarus can be used in studies where a related reference genome is available, as well as for non-model organisms. The tool is available online and as a standalone application.

UR - http://www.scopus.com/inward/record.url?scp=84994568471&partnerID=8YFLogxK

U2 - 10.1093/bioinformatics/btw379

DO - 10.1093/bioinformatics/btw379

M3 - Article

C2 - 27378299

VL - 32

SP - 3321

EP - 3323

JO - Bioinformatics

JF - Bioinformatics

SN - 1367-4803

IS - 21

ER -

ID: 7608108