Standard

Complete genome sequence of Treponema succinifaciens type strain (6091 T). / Han, Cliff; Gronow, Sabine; Teshima, Hazuki; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Zeytun, Ahmed; Tapia, Roxanne; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Huntemann, Marcel; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne Marie; Rohde, Manfred; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Detter, John C.

в: Standards in Genomic Sciences, Том 4, № 3, 2011, стр. 361-370.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Han, C, Gronow, S, Teshima, H, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Zeytun, A, Tapia, R, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Mavromatis, K, Mikhailova, N, Huntemann, M, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Brambilla, EM, Rohde, M, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Detter, JC 2011, 'Complete genome sequence of Treponema succinifaciens type strain (6091 T)', Standards in Genomic Sciences, Том. 4, № 3, стр. 361-370. https://doi.org/10.4056/sigs.1984594

APA

Han, C., Gronow, S., Teshima, H., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Zeytun, A., Tapia, R., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Ivanova, N., Mavromatis, K., Mikhailova, N., Huntemann, M., ... Detter, J. C. (2011). Complete genome sequence of Treponema succinifaciens type strain (6091 T). Standards in Genomic Sciences, 4(3), 361-370. https://doi.org/10.4056/sigs.1984594

Vancouver

Han C, Gronow S, Teshima H, Lapidus A, Nolan M, Lucas S и пр. Complete genome sequence of Treponema succinifaciens type strain (6091 T). Standards in Genomic Sciences. 2011;4(3):361-370. https://doi.org/10.4056/sigs.1984594

Author

Han, Cliff ; Gronow, Sabine ; Teshima, Hazuki ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Zeytun, Ahmed ; Tapia, Roxanne ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Huntemann, Marcel ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Brambilla, Evelyne Marie ; Rohde, Manfred ; Göker, Markus ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Detter, John C. / Complete genome sequence of Treponema succinifaciens type strain (6091 T). в: Standards in Genomic Sciences. 2011 ; Том 4, № 3. стр. 361-370.

BibTeX

@article{9aaba3960eff49dcb59d9978977eb059,
title = "Complete genome sequence of Treponema succinifaciens type strain (6091 T)",
abstract = "Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. This feature separates this species from most other anaerobic spirochetes. The genome of T. succinifaciens 6091 T is only the second completed and published type strain genome from the genus Treponema in the family Spirochaetaceae. The 2,897,425 bp long genome with one plasmid harbors 2,723 protein-coding and 63 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Anaerobic, Chemoorganotrophic, GEBA, Gram-negative, Mesophilic, Motile, Spirochaeta-ceae",
author = "Cliff Han and Sabine Gronow and Hazuki Teshima and Alla Lapidus and Matt Nolan and Susan Lucas and Nancy Hammon and Shweta Deshpande and Cheng, {Jan Fang} and Ahmed Zeytun and Roxanne Tapia and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Natalia Ivanova and Konstantinos Mavromatis and Natalia Mikhailova and Marcel Huntemann and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Brambilla, {Evelyne Marie} and Manfred Rohde and Markus G{\"o}ker and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Detter, {John C.}",
note = "Funding Information: Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344, and Los Alamos National Laboratory under contract No. DE-AC02-06NA25396, UT-Battelle and Oak Ridge National Laboratory under contract DE-AC05-00OR22725, as well as German Research Foundation (DFG) INST 599/1-2. Funding Information: We would like to gratefully acknowledge the help of Sabine Welnitz (DSMZ) for growing T. succinifaciens cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,",
year = "2011",
doi = "10.4056/sigs.1984594",
language = "English",
volume = "4",
pages = "361--370",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Treponema succinifaciens type strain (6091 T)

AU - Han, Cliff

AU - Gronow, Sabine

AU - Teshima, Hazuki

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Lucas, Susan

AU - Hammon, Nancy

AU - Deshpande, Shweta

AU - Cheng, Jan Fang

AU - Zeytun, Ahmed

AU - Tapia, Roxanne

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Pagani, Ioanna

AU - Ivanova, Natalia

AU - Mavromatis, Konstantinos

AU - Mikhailova, Natalia

AU - Huntemann, Marcel

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Brambilla, Evelyne Marie

AU - Rohde, Manfred

AU - Göker, Markus

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Detter, John C.

N1 - Funding Information: Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344, and Los Alamos National Laboratory under contract No. DE-AC02-06NA25396, UT-Battelle and Oak Ridge National Laboratory under contract DE-AC05-00OR22725, as well as German Research Foundation (DFG) INST 599/1-2. Funding Information: We would like to gratefully acknowledge the help of Sabine Welnitz (DSMZ) for growing T. succinifaciens cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,

PY - 2011

Y1 - 2011

N2 - Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. This feature separates this species from most other anaerobic spirochetes. The genome of T. succinifaciens 6091 T is only the second completed and published type strain genome from the genus Treponema in the family Spirochaetaceae. The 2,897,425 bp long genome with one plasmid harbors 2,723 protein-coding and 63 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. This feature separates this species from most other anaerobic spirochetes. The genome of T. succinifaciens 6091 T is only the second completed and published type strain genome from the genus Treponema in the family Spirochaetaceae. The 2,897,425 bp long genome with one plasmid harbors 2,723 protein-coding and 63 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Anaerobic

KW - Chemoorganotrophic

KW - GEBA

KW - Gram-negative

KW - Mesophilic

KW - Motile

KW - Spirochaeta-ceae

UR - http://www.scopus.com/inward/record.url?scp=80053342457&partnerID=8YFLogxK

U2 - 10.4056/sigs.1984594

DO - 10.4056/sigs.1984594

M3 - Article

AN - SCOPUS:80053342457

VL - 4

SP - 361

EP - 370

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 3

ER -

ID: 85686530