Standard

Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T). / Kiss, Hajnalka; Cleland, David; Lapidus, Alla; Lucas, Susan; del Rio, Tijana Glavina; Nolan, Matt; Tice, Hope; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Lu, Megan; Brettin, Thomas; Detter, John C.; Göker, Markus; Tindall, Brian J.; Beck, Brian; Mcdermott, Timothy R.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Cheng, Jan Fang.

в: Standards in Genomic Sciences, Том 3, № 2, 2010, стр. 153-162.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Kiss, H, Cleland, D, Lapidus, A, Lucas, S, del Rio, TG, Nolan, M, Tice, H, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Lu, M, Brettin, T, Detter, JC, Göker, M, Tindall, BJ, Beck, B, Mcdermott, TR, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Cheng, JF 2010, 'Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T)', Standards in Genomic Sciences, Том. 3, № 2, стр. 153-162. https://doi.org/10.4056/sigs.1153107

APA

Kiss, H., Cleland, D., Lapidus, A., Lucas, S., del Rio, T. G., Nolan, M., Tice, H., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., ... Cheng, J. F. (2010). Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T). Standards in Genomic Sciences, 3(2), 153-162. https://doi.org/10.4056/sigs.1153107

Vancouver

Kiss H, Cleland D, Lapidus A, Lucas S, del Rio TG, Nolan M и пр. Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T). Standards in Genomic Sciences. 2010;3(2):153-162. https://doi.org/10.4056/sigs.1153107

Author

Kiss, Hajnalka ; Cleland, David ; Lapidus, Alla ; Lucas, Susan ; del Rio, Tijana Glavina ; Nolan, Matt ; Tice, Hope ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Lu, Megan ; Brettin, Thomas ; Detter, John C. ; Göker, Markus ; Tindall, Brian J. ; Beck, Brian ; Mcdermott, Timothy R. ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Cheng, Jan Fang. / Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T). в: Standards in Genomic Sciences. 2010 ; Том 3, № 2. стр. 153-162.

BibTeX

@article{ac6ee728e20d448b90658d45a95121dc,
title = "Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T)",
abstract = "'Thermobaculum terrenum' Botero et al. 2004 is the sole species within the proposed genus 'Thermobaculum'. Strain YNP1 T is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi. At present, the name 'Thermobaculum terrenum' is not yet validly published as it contravenes Rule 30 (3a) of the Bacteriological Code. The bacterium was isolated from a slightly acidic extreme thermal soil in Yellowstone National Park, Wyoming (USA). Depending on its final taxonomic allocation, this is likely to be the third completed genome sequence of a member of the class Thermomicrobia and the seventh type strain genome from the phylum Chloroflexi. The 3,101,581 bp long genome with its 2,872 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Chloroflexi, Extreme thermal soil, GEBA, Gram-positive, Incertae sedis, Non-sporeforming, Nonmotile, Obligate aerobe, Thermoacidophile",
author = "Hajnalka Kiss and David Cleland and Alla Lapidus and Susan Lucas and {del Rio}, {Tijana Glavina} and Matt Nolan and Hope Tice and Cliff Han and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Konstantinos Mavromatis and Galina Ovchinnikova and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Megan Lu and Thomas Brettin and Detter, {John C.} and Markus G{\"o}ker and Tindall, {Brian J.} and Brian Beck and Mcdermott, {Timothy R.} and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Cheng, {Jan Fang}",
note = "Funding Information: This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231, Lawrence",
year = "2010",
doi = "10.4056/sigs.1153107",
language = "English",
volume = "3",
pages = "153--162",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "2",

}

RIS

TY - JOUR

T1 - Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1 T)

AU - Kiss, Hajnalka

AU - Cleland, David

AU - Lapidus, Alla

AU - Lucas, Susan

AU - del Rio, Tijana Glavina

AU - Nolan, Matt

AU - Tice, Hope

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Mavromatis, Konstantinos

AU - Ovchinnikova, Galina

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Lu, Megan

AU - Brettin, Thomas

AU - Detter, John C.

AU - Göker, Markus

AU - Tindall, Brian J.

AU - Beck, Brian

AU - Mcdermott, Timothy R.

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Cheng, Jan Fang

N1 - Funding Information: This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231, Lawrence

PY - 2010

Y1 - 2010

N2 - 'Thermobaculum terrenum' Botero et al. 2004 is the sole species within the proposed genus 'Thermobaculum'. Strain YNP1 T is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi. At present, the name 'Thermobaculum terrenum' is not yet validly published as it contravenes Rule 30 (3a) of the Bacteriological Code. The bacterium was isolated from a slightly acidic extreme thermal soil in Yellowstone National Park, Wyoming (USA). Depending on its final taxonomic allocation, this is likely to be the third completed genome sequence of a member of the class Thermomicrobia and the seventh type strain genome from the phylum Chloroflexi. The 3,101,581 bp long genome with its 2,872 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - 'Thermobaculum terrenum' Botero et al. 2004 is the sole species within the proposed genus 'Thermobaculum'. Strain YNP1 T is the only cultivated member of an acid tolerant, extremely thermophilic species belonging to a phylogenetically isolated environmental clone group within the phylum Chloroflexi. At present, the name 'Thermobaculum terrenum' is not yet validly published as it contravenes Rule 30 (3a) of the Bacteriological Code. The bacterium was isolated from a slightly acidic extreme thermal soil in Yellowstone National Park, Wyoming (USA). Depending on its final taxonomic allocation, this is likely to be the third completed genome sequence of a member of the class Thermomicrobia and the seventh type strain genome from the phylum Chloroflexi. The 3,101,581 bp long genome with its 2,872 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Chloroflexi

KW - Extreme thermal soil

KW - GEBA

KW - Gram-positive

KW - Incertae sedis

KW - Non-sporeforming

KW - Nonmotile

KW - Obligate aerobe

KW - Thermoacidophile

UR - http://www.scopus.com/inward/record.url?scp=80053452173&partnerID=8YFLogxK

U2 - 10.4056/sigs.1153107

DO - 10.4056/sigs.1153107

M3 - Article

AN - SCOPUS:80053452173

VL - 3

SP - 153

EP - 162

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 2

ER -

ID: 87746726