Standard

Complete genome sequence of Rhodothermus marinus type strain (R-10 T). / Nolan, Matt; Tindall, Brian J.; Pomrenke, Helga; Lapidus, Alla; Copeland, Alex; del Rio, Tijana Glavina; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Saunders, Elizabeth; Han, Cliff; Bruce, David; Goodwin, Lynne; Chain, Patrick; Pitluck, Sam; Ovchinikova, Galina; Pati, Amrita; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brettin, Thomas; Göker, Markus; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Detter, John C.

в: Standards in Genomic Sciences, Том 1, № 3, 2009, стр. 283-291.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Nolan, M, Tindall, BJ, Pomrenke, H, Lapidus, A, Copeland, A, del Rio, TG, Lucas, S, Chen, F, Tice, H, Cheng, JF, Saunders, E, Han, C, Bruce, D, Goodwin, L, Chain, P, Pitluck, S, Ovchinikova, G, Pati, A, Mavromatis, K, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Brettin, T, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Detter, JC 2009, 'Complete genome sequence of Rhodothermus marinus type strain (R-10 T)', Standards in Genomic Sciences, Том. 1, № 3, стр. 283-291. https://doi.org/10.4056/sigs.46736

APA

Nolan, M., Tindall, B. J., Pomrenke, H., Lapidus, A., Copeland, A., del Rio, T. G., Lucas, S., Chen, F., Tice, H., Cheng, J. F., Saunders, E., Han, C., Bruce, D., Goodwin, L., Chain, P., Pitluck, S., Ovchinikova, G., Pati, A., Mavromatis, K., ... Detter, J. C. (2009). Complete genome sequence of Rhodothermus marinus type strain (R-10 T). Standards in Genomic Sciences, 1(3), 283-291. https://doi.org/10.4056/sigs.46736

Vancouver

Nolan M, Tindall BJ, Pomrenke H, Lapidus A, Copeland A, del Rio TG и пр. Complete genome sequence of Rhodothermus marinus type strain (R-10 T). Standards in Genomic Sciences. 2009;1(3):283-291. https://doi.org/10.4056/sigs.46736

Author

Nolan, Matt ; Tindall, Brian J. ; Pomrenke, Helga ; Lapidus, Alla ; Copeland, Alex ; del Rio, Tijana Glavina ; Lucas, Susan ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Saunders, Elizabeth ; Han, Cliff ; Bruce, David ; Goodwin, Lynne ; Chain, Patrick ; Pitluck, Sam ; Ovchinikova, Galina ; Pati, Amrita ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Brettin, Thomas ; Göker, Markus ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Detter, John C. / Complete genome sequence of Rhodothermus marinus type strain (R-10 T). в: Standards in Genomic Sciences. 2009 ; Том 1, № 3. стр. 283-291.

BibTeX

@article{28f568892340406887730dc7101f093a,
title = "Complete genome sequence of Rhodothermus marinus type strain (R-10 T)",
abstract = "Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10 T is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Alkaliphile, Heterotroph, Non-sporulating, Nonmotile, Rhodothermaceae, Sphingobacteriales, Thermophile",
author = "Matt Nolan and Tindall, {Brian J.} and Helga Pomrenke and Alla Lapidus and Alex Copeland and {del Rio}, {Tijana Glavina} and Susan Lucas and Feng Chen and Hope Tice and Cheng, {Jan Fang} and Elizabeth Saunders and Cliff Han and David Bruce and Lynne Goodwin and Patrick Chain and Sam Pitluck and Galina Ovchinikova and Amrita Pati and Konstantinos Mavromatis and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Thomas Brettin and Markus G{\"o}ker and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Detter, {John C.}",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence",
year = "2009",
doi = "10.4056/sigs.46736",
language = "English",
volume = "1",
pages = "283--291",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Rhodothermus marinus type strain (R-10 T)

AU - Nolan, Matt

AU - Tindall, Brian J.

AU - Pomrenke, Helga

AU - Lapidus, Alla

AU - Copeland, Alex

AU - del Rio, Tijana Glavina

AU - Lucas, Susan

AU - Chen, Feng

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Saunders, Elizabeth

AU - Han, Cliff

AU - Bruce, David

AU - Goodwin, Lynne

AU - Chain, Patrick

AU - Pitluck, Sam

AU - Ovchinikova, Galina

AU - Pati, Amrita

AU - Mavromatis, Konstantinos

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Brettin, Thomas

AU - Göker, Markus

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Detter, John C.

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence

PY - 2009

Y1 - 2009

N2 - Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10 T is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10 T is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10 T is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Alkaliphile

KW - Heterotroph

KW - Non-sporulating

KW - Nonmotile

KW - Rhodothermaceae

KW - Sphingobacteriales

KW - Thermophile

UR - http://www.scopus.com/inward/record.url?scp=77749257699&partnerID=8YFLogxK

U2 - 10.4056/sigs.46736

DO - 10.4056/sigs.46736

M3 - Article

AN - SCOPUS:77749257699

VL - 1

SP - 283

EP - 291

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 3

ER -

ID: 90041561