Standard

Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T). / Anderson, Iain; Tindall, Brian J.; Pomrenke, Helga; Göker, Markus; Lapidus, Alla; Nolan, Matt; Copeland, Alex; del Rio, Tijana Glavina; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Lucas, Susan; Chertkov, Olga; Bruce, David; Brettin, Thomas; Detter, John C.; Han, Cliff; Goodwin, Lynne; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Pitluck, Sam; Pati, Amrita; Mavromatis, Konstantinos; Ovchinnikova, Galina; Chen, Amy; Palaniappan, Krishna; Chain, Patrick; Rohde, Manfred; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

в: Standards in Genomic Sciences, Том 1, № 3, 2009, стр. 218-225.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Anderson, I, Tindall, BJ, Pomrenke, H, Göker, M, Lapidus, A, Nolan, M, Copeland, A, del Rio, TG, Chen, F, Tice, H, Cheng, JF, Lucas, S, Chertkov, O, Bruce, D, Brettin, T, Detter, JC, Han, C, Goodwin, L, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Pitluck, S, Pati, A, Mavromatis, K, Ovchinnikova, G, Chen, A, Palaniappan, K, Chain, P, Rohde, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2009, 'Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T)', Standards in Genomic Sciences, Том. 1, № 3, стр. 218-225. https://doi.org/10.4056/sigs.31864

APA

Anderson, I., Tindall, B. J., Pomrenke, H., Göker, M., Lapidus, A., Nolan, M., Copeland, A., del Rio, T. G., Chen, F., Tice, H., Cheng, J. F., Lucas, S., Chertkov, O., Bruce, D., Brettin, T., Detter, J. C., Han, C., Goodwin, L., Land, M., ... Klenk, H. P. (2009). Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T). Standards in Genomic Sciences, 1(3), 218-225. https://doi.org/10.4056/sigs.31864

Vancouver

Anderson I, Tindall BJ, Pomrenke H, Göker M, Lapidus A, Nolan M и пр. Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T). Standards in Genomic Sciences. 2009;1(3):218-225. https://doi.org/10.4056/sigs.31864

Author

Anderson, Iain ; Tindall, Brian J. ; Pomrenke, Helga ; Göker, Markus ; Lapidus, Alla ; Nolan, Matt ; Copeland, Alex ; del Rio, Tijana Glavina ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Lucas, Susan ; Chertkov, Olga ; Bruce, David ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Goodwin, Lynne ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Pitluck, Sam ; Pati, Amrita ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Chen, Amy ; Palaniappan, Krishna ; Chain, Patrick ; Rohde, Manfred ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T). в: Standards in Genomic Sciences. 2009 ; Том 1, № 3. стр. 218-225.

BibTeX

@article{a7937f5feb664b64a2bb2acdd952c369,
title = "Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T)",
abstract = "Halorhabdus utahensis Wain{\o} et al. 2000 is the type species of the genus, which is of phylogenetic interest because of its location on one of the deepest branches within the very extensive euryarchaeal family Halobacteriaceae. H. utahensis is a free-living, motile, rod shaped to pleomorphic, Gram-negative archaeon, which was originally isolated from a sediment sample collected from the southern arm of Great Salt Lake, Utah, USA. When grown on appropriate media, H. utahensis can form polyhydroxybutyrate (PHB). Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the a member of halobacterial genus Halorhabdus, and the 3,116,795 bp long single replicon genome with its 3027 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Euryarchaeon, Free-living, Halobacteriaceae, Halophile, Non-pathogenic",
author = "Iain Anderson and Tindall, {Brian J.} and Helga Pomrenke and Markus G{\"o}ker and Alla Lapidus and Matt Nolan and Alex Copeland and {del Rio}, {Tijana Glavina} and Feng Chen and Hope Tice and Cheng, {Jan Fang} and Susan Lucas and Olga Chertkov and David Bruce and Thomas Brettin and Detter, {John C.} and Cliff Han and Lynne Goodwin and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Sam Pitluck and Amrita Pati and Konstantinos Mavromatis and Galina Ovchinnikova and Amy Chen and Krishna Palaniappan and Patrick Chain and Manfred Rohde and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
note = "Funding Information: We gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley",
year = "2009",
doi = "10.4056/sigs.31864",
language = "English",
volume = "1",
pages = "218--225",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Halorhabdus utahensis type strain (AX-2 T)

AU - Anderson, Iain

AU - Tindall, Brian J.

AU - Pomrenke, Helga

AU - Göker, Markus

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Copeland, Alex

AU - del Rio, Tijana Glavina

AU - Chen, Feng

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Lucas, Susan

AU - Chertkov, Olga

AU - Bruce, David

AU - Brettin, Thomas

AU - Detter, John C.

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Pitluck, Sam

AU - Pati, Amrita

AU - Mavromatis, Konstantinos

AU - Ovchinnikova, Galina

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Chain, Patrick

AU - Rohde, Manfred

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

N1 - Funding Information: We gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley

PY - 2009

Y1 - 2009

N2 - Halorhabdus utahensis Wainø et al. 2000 is the type species of the genus, which is of phylogenetic interest because of its location on one of the deepest branches within the very extensive euryarchaeal family Halobacteriaceae. H. utahensis is a free-living, motile, rod shaped to pleomorphic, Gram-negative archaeon, which was originally isolated from a sediment sample collected from the southern arm of Great Salt Lake, Utah, USA. When grown on appropriate media, H. utahensis can form polyhydroxybutyrate (PHB). Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the a member of halobacterial genus Halorhabdus, and the 3,116,795 bp long single replicon genome with its 3027 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Halorhabdus utahensis Wainø et al. 2000 is the type species of the genus, which is of phylogenetic interest because of its location on one of the deepest branches within the very extensive euryarchaeal family Halobacteriaceae. H. utahensis is a free-living, motile, rod shaped to pleomorphic, Gram-negative archaeon, which was originally isolated from a sediment sample collected from the southern arm of Great Salt Lake, Utah, USA. When grown on appropriate media, H. utahensis can form polyhydroxybutyrate (PHB). Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the a member of halobacterial genus Halorhabdus, and the 3,116,795 bp long single replicon genome with its 3027 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Euryarchaeon

KW - Free-living

KW - Halobacteriaceae

KW - Halophile

KW - Non-pathogenic

UR - http://www.scopus.com/inward/record.url?scp=79957464372&partnerID=8YFLogxK

U2 - 10.4056/sigs.31864

DO - 10.4056/sigs.31864

M3 - Article

AN - SCOPUS:79957464372

VL - 1

SP - 218

EP - 225

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 3

ER -

ID: 90133119