Standard

Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T). / Daum, Chris; Lang, Elke; Abt, Birte; Kopitz, Markus; Saunders, Elizabeth; Lapidus, Alla; Lucas, Susan; del Rio, Tijana Glavina; Nolan, Matt; Tice, Hope; Copeland, Alex; Cheng, Jan Fang; Chen, Feng; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Detter, John C.; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Bristow, Jim; Markowitz, Victor; Eisen, Jonathan A.; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

в: Standards in Genomic Sciences, Том 2, № 1, 2010, стр. 96-106.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Daum, C, Lang, E, Abt, B, Kopitz, M, Saunders, E, Lapidus, A, Lucas, S, del Rio, TG, Nolan, M, Tice, H, Copeland, A, Cheng, JF, Chen, F, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Detter, JC, Brettin, T, Rohde, M, Göker, M, Bristow, J, Markowitz, V, Eisen, JA, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T)', Standards in Genomic Sciences, Том. 2, № 1, стр. 96-106. https://doi.org/10.4056/sigs.69.1277

APA

Daum, C., Lang, E., Abt, B., Kopitz, M., Saunders, E., Lapidus, A., Lucas, S., del Rio, T. G., Nolan, M., Tice, H., Copeland, A., Cheng, J. F., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Pati, A., Chen, A., ... Klenk, H. P. (2010). Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T). Standards in Genomic Sciences, 2(1), 96-106. https://doi.org/10.4056/sigs.69.1277

Vancouver

Daum C, Lang E, Abt B, Kopitz M, Saunders E, Lapidus A и пр. Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T). Standards in Genomic Sciences. 2010;2(1):96-106. https://doi.org/10.4056/sigs.69.1277

Author

Daum, Chris ; Lang, Elke ; Abt, Birte ; Kopitz, Markus ; Saunders, Elizabeth ; Lapidus, Alla ; Lucas, Susan ; del Rio, Tijana Glavina ; Nolan, Matt ; Tice, Hope ; Copeland, Alex ; Cheng, Jan Fang ; Chen, Feng ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Detter, John C. ; Brettin, Thomas ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Markowitz, Victor ; Eisen, Jonathan A. ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T). в: Standards in Genomic Sciences. 2010 ; Том 2, № 1. стр. 96-106.

BibTeX

@article{4138e35aeb91425ba7f837beac2f9e3e,
title = "Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T)",
abstract = "Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family 'Haliangiaceae'. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and an-notation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Decomposition of bacterial and yeast cells, Fruiting bodies, GEBA, Gliding, Gram-negative, Mesophile, Moderately halophilic, Myxobacteria, Myxococcales",
author = "Chris Daum and Elke Lang and Birte Abt and Markus Kopitz and Elizabeth Saunders and Alla Lapidus and Susan Lucas and {del Rio}, {Tijana Glavina} and Matt Nolan and Hope Tice and Alex Copeland and Cheng, {Jan Fang} and Feng Chen and David Bruce and Lynne Goodwin and Sam Pitluck and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Detter, {John C.} and Thomas Brettin and Manfred Rohde and Markus G{\"o}ker and Jim Bristow and Victor Markowitz and Eisen, {Jonathan A.} and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence",
year = "2010",
doi = "10.4056/sigs.69.1277",
language = "English",
volume = "2",
pages = "96--106",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Haliangium ochraceum type strain (SMP-2 T)

AU - Daum, Chris

AU - Lang, Elke

AU - Abt, Birte

AU - Kopitz, Markus

AU - Saunders, Elizabeth

AU - Lapidus, Alla

AU - Lucas, Susan

AU - del Rio, Tijana Glavina

AU - Nolan, Matt

AU - Tice, Hope

AU - Copeland, Alex

AU - Cheng, Jan Fang

AU - Chen, Feng

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Detter, John C.

AU - Brettin, Thomas

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, Jim

AU - Markowitz, Victor

AU - Eisen, Jonathan A.

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence

PY - 2010

Y1 - 2010

N2 - Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family 'Haliangiaceae'. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and an-notation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family 'Haliangiaceae'. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and an-notation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Decomposition of bacterial and yeast cells

KW - Fruiting bodies

KW - GEBA

KW - Gliding

KW - Gram-negative

KW - Mesophile

KW - Moderately halophilic

KW - Myxobacteria

KW - Myxococcales

UR - http://www.scopus.com/inward/record.url?scp=78751547656&partnerID=8YFLogxK

U2 - 10.4056/sigs.69.1277

DO - 10.4056/sigs.69.1277

M3 - Article

AN - SCOPUS:78751547656

VL - 2

SP - 96

EP - 106

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 90136465