Standard

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T). / Spring, Stefan; Lapidus, Alla; Schröder, Maren; Gleim, Dorothea; Sims, David; Meincke, Linda; del Rio, Tijana Glavina; Tice, Hope; Copeland, Alex; Cheng, Jan Fang; Lucas, Susan; Chen, Feng; Nolan, Matt; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Saunders, Elizabeth; Brettin, Thomas; Detter, John C.; Göker, Markus; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Han, Cliff.

в: Standards in Genomic Sciences, Том 1, № 3, 2009, стр. 242-253.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Spring, S, Lapidus, A, Schröder, M, Gleim, D, Sims, D, Meincke, L, del Rio, TG, Tice, H, Copeland, A, Cheng, JF, Lucas, S, Chen, F, Nolan, M, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Saunders, E, Brettin, T, Detter, JC, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Han, C 2009, 'Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T)', Standards in Genomic Sciences, Том. 1, № 3, стр. 242-253. https://doi.org/10.4056/sigs.39508

APA

Spring, S., Lapidus, A., Schröder, M., Gleim, D., Sims, D., Meincke, L., del Rio, T. G., Tice, H., Copeland, A., Cheng, J. F., Lucas, S., Chen, F., Nolan, M., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Pati, A., Chen, A., ... Han, C. (2009). Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T). Standards in Genomic Sciences, 1(3), 242-253. https://doi.org/10.4056/sigs.39508

Vancouver

Spring S, Lapidus A, Schröder M, Gleim D, Sims D, Meincke L и пр. Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T). Standards in Genomic Sciences. 2009;1(3):242-253. https://doi.org/10.4056/sigs.39508

Author

Spring, Stefan ; Lapidus, Alla ; Schröder, Maren ; Gleim, Dorothea ; Sims, David ; Meincke, Linda ; del Rio, Tijana Glavina ; Tice, Hope ; Copeland, Alex ; Cheng, Jan Fang ; Lucas, Susan ; Chen, Feng ; Nolan, Matt ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Saunders, Elizabeth ; Brettin, Thomas ; Detter, John C. ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Han, Cliff. / Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T). в: Standards in Genomic Sciences. 2009 ; Том 1, № 3. стр. 242-253.

BibTeX

@article{5f4a25a8c28f47659b69d3fd277468e7,
title = "Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T)",
abstract = "Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfatereducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575 T, isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Clostridiales, Firmicutes, Hydrogen sulfide, Mesophile, Motile, Obligate anaerobic, Peptococcaceae, Piggery waste, Sporulating, Sulfate-reducer",
author = "Stefan Spring and Alla Lapidus and Maren Schr{\"o}der and Dorothea Gleim and David Sims and Linda Meincke and {del Rio}, {Tijana Glavina} and Hope Tice and Alex Copeland and Cheng, {Jan Fang} and Susan Lucas and Feng Chen and Matt Nolan and David Bruce and Lynne Goodwin and Sam Pitluck and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Patrick Chain and Elizabeth Saunders and Thomas Brettin and Detter, {John C.} and Markus G{\"o}ker and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Cliff Han",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence",
year = "2009",
doi = "10.4056/sigs.39508",
language = "English",
volume = "1",
pages = "242--253",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575 T)

AU - Spring, Stefan

AU - Lapidus, Alla

AU - Schröder, Maren

AU - Gleim, Dorothea

AU - Sims, David

AU - Meincke, Linda

AU - del Rio, Tijana Glavina

AU - Tice, Hope

AU - Copeland, Alex

AU - Cheng, Jan Fang

AU - Lucas, Susan

AU - Chen, Feng

AU - Nolan, Matt

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Chain, Patrick

AU - Saunders, Elizabeth

AU - Brettin, Thomas

AU - Detter, John C.

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Han, Cliff

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence

PY - 2009

Y1 - 2009

N2 - Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfatereducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575 T, isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfatereducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575 T, isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Clostridiales

KW - Firmicutes

KW - Hydrogen sulfide

KW - Mesophile

KW - Motile

KW - Obligate anaerobic

KW - Peptococcaceae

KW - Piggery waste

KW - Sporulating

KW - Sulfate-reducer

UR - http://www.scopus.com/inward/record.url?scp=79956090822&partnerID=8YFLogxK

U2 - 10.4056/sigs.39508

DO - 10.4056/sigs.39508

M3 - Article

AN - SCOPUS:79956090822

VL - 1

SP - 242

EP - 253

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 3

ER -

ID: 90133468