Standard

Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T). / del Rio, Tijana Glavina; Abt, Birte; Spring, Stefan; Lapidus, Alla; Nolan, Matt; Tice, Hope; Copeland, Alex; Cheng, Jan Fang; Chen, Feng; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Saunders, Elizabeth; Detter, John C.; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lucas, Susan.

в: Standards in Genomic Sciences, Том 2, № 1, 2010, стр. 87-95.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

del Rio, TG, Abt, B, Spring, S, Lapidus, A, Nolan, M, Tice, H, Copeland, A, Cheng, JF, Chen, F, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Saunders, E, Detter, JC, Brettin, T, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lucas, S 2010, 'Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T)', Standards in Genomic Sciences, Том. 2, № 1, стр. 87-95. https://doi.org/10.4056/sigs.661199

APA

del Rio, T. G., Abt, B., Spring, S., Lapidus, A., Nolan, M., Tice, H., Copeland, A., Cheng, J. F., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., ... Lucas, S. (2010). Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T). Standards in Genomic Sciences, 2(1), 87-95. https://doi.org/10.4056/sigs.661199

Vancouver

del Rio TG, Abt B, Spring S, Lapidus A, Nolan M, Tice H и пр. Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T). Standards in Genomic Sciences. 2010;2(1):87-95. https://doi.org/10.4056/sigs.661199

Author

del Rio, Tijana Glavina ; Abt, Birte ; Spring, Stefan ; Lapidus, Alla ; Nolan, Matt ; Tice, Hope ; Copeland, Alex ; Cheng, Jan Fang ; Chen, Feng ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Saunders, Elizabeth ; Detter, John C. ; Brettin, Thomas ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lucas, Susan. / Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T). в: Standards in Genomic Sciences. 2010 ; Том 2, № 1. стр. 87-95.

BibTeX

@article{1be01f8d847c4e85b9256e2b28dd4eb3,
title = "Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T)",
abstract = "Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family 'Chitinophagaceae'. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family 'Chitinophagaceae', and the 9,127,347 bp long single replicon genome with its 7,397 protein-coding and 95 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "'Chitinophagaceae', Aerobic, Biomass degrader, Chitinolytic, Filamentous, GEBA, Gliding, Gram-negative, Mesophile, Myxospores",
author = "{del Rio}, {Tijana Glavina} and Birte Abt and Stefan Spring and Alla Lapidus and Matt Nolan and Hope Tice and Alex Copeland and Cheng, {Jan Fang} and Feng Chen and David Bruce and Lynne Goodwin and Sam Pitluck and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Patrick Chain and Elizabeth Saunders and Detter, {John C.} and Thomas Brettin and Manfred Rohde and Markus G{\"o}ker and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Susan Lucas",
note = "Funding Information: We would like to gratefully acknowledge the help of Birgit Merkhoffer for growing C. pinensis cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California,",
year = "2010",
doi = "10.4056/sigs.661199",
language = "English",
volume = "2",
pages = "87--95",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034 T)

AU - del Rio, Tijana Glavina

AU - Abt, Birte

AU - Spring, Stefan

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Tice, Hope

AU - Copeland, Alex

AU - Cheng, Jan Fang

AU - Chen, Feng

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Chain, Patrick

AU - Saunders, Elizabeth

AU - Detter, John C.

AU - Brettin, Thomas

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Lucas, Susan

N1 - Funding Information: We would like to gratefully acknowledge the help of Birgit Merkhoffer for growing C. pinensis cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California,

PY - 2010

Y1 - 2010

N2 - Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family 'Chitinophagaceae'. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family 'Chitinophagaceae', and the 9,127,347 bp long single replicon genome with its 7,397 protein-coding and 95 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family 'Chitinophagaceae'. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family 'Chitinophagaceae', and the 9,127,347 bp long single replicon genome with its 7,397 protein-coding and 95 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - 'Chitinophagaceae'

KW - Aerobic

KW - Biomass degrader

KW - Chitinolytic

KW - Filamentous

KW - GEBA

KW - Gliding

KW - Gram-negative

KW - Mesophile

KW - Myxospores

UR - http://www.scopus.com/inward/record.url?scp=78650025969&partnerID=8YFLogxK

U2 - 10.4056/sigs.661199

DO - 10.4056/sigs.661199

M3 - Article

AN - SCOPUS:78650025969

VL - 2

SP - 87

EP - 95

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 90136760