Standard

Complete genome sequence of Actinosynnema mirum type strain (101 T). / Land, Miriam; Lapidus, Alla; Mayilraj, Shanmugam; Chen, Feng; Copeland, Alex; del Rio, Tijana Glavina; Nolan, Matt; Lucas, Susan; Tice, Hope; Cheng, Jan Fang; Chertkov, Olga; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Rohde, Manfred; Göker, Markus; Pati, Amrita; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia C.; Brettin, Thomas; Detter, John C.; Han, Cliff; Chain, Patrick; Tindall, Brian J.; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

в: Standards in Genomic Sciences, Том 1, № 1, 2009, стр. 46-53.

Результаты исследований: Научные публикации в периодических изданиях › статья › Рецензирование

Harvard

Land, M, Lapidus, A, Mayilraj, S, Chen, F, Copeland, A, del Rio, TG, Nolan, M, Lucas, S, Tice, H, Cheng, JF, Chertkov, O, Bruce, D, Goodwin, L, Pitluck, S, Rohde, M, Göker, M, Pati, A, Mavromatis, K, Chen, A, Palaniappan, K, Hauser, L, Chang, YJ, Jeffries, CC, Brettin, T, Detter, JC, Han, C, Chain, P, Tindall, BJ, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2009, 'Complete genome sequence of Actinosynnema mirum type strain (101 T)', Standards in Genomic Sciences, Том. 1, № 1, стр. 46-53. https://doi.org/10.4056/sigs.21137

APA

Land, M., Lapidus, A., Mayilraj, S., Chen, F., Copeland, A., del Rio, T. G., Nolan, M., Lucas, S., Tice, H., Cheng, J. F., Chertkov, O., Bruce, D., Goodwin, L., Pitluck, S., Rohde, M., Göker, M., Pati, A., Mavromatis, K., Chen, A., ... Klenk, H. P. (2009). Complete genome sequence of Actinosynnema mirum type strain (101 T). Standards in Genomic Sciences, 1(1), 46-53. https://doi.org/10.4056/sigs.21137

Vancouver

Land M, Lapidus A, Mayilraj S, Chen F, Copeland A, del Rio TG и пр. Complete genome sequence of Actinosynnema mirum type strain (101 T). Standards in Genomic Sciences. 2009;1(1):46-53. https://doi.org/10.4056/sigs.21137

Author

Land, Miriam ; Lapidus, Alla ; Mayilraj, Shanmugam ; Chen, Feng ; Copeland, Alex ; del Rio, Tijana Glavina ; Nolan, Matt ; Lucas, Susan ; Tice, Hope ; Cheng, Jan Fang ; Chertkov, Olga ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Rohde, Manfred ; Göker, Markus ; Pati, Amrita ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia C. ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Chain, Patrick ; Tindall, Brian J. ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Actinosynnema mirum type strain (101 T). в: Standards in Genomic Sciences. 2009 ; Том 1, № 1. стр. 46-53.

BibTeX

@article{5d65e02569df45fa9f31a5cfaf5e0a22,
title = "Complete genome sequence of Actinosynnema mirum type strain (101 T)",
abstract = "Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino- synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo- nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO 2 atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein- coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Actinosynnemataceae, Aerial and substrate mycelium, Aerobic, Mesophile, Motile spores, Nocardicin a producer, Soluble pigments, Synnemata",
author = "Miriam Land and Alla Lapidus and Shanmugam Mayilraj and Feng Chen and Alex Copeland and {del Rio}, {Tijana Glavina} and Matt Nolan and Susan Lucas and Hope Tice and Cheng, {Jan Fang} and Olga Chertkov and David Bruce and Lynne Goodwin and Sam Pitluck and Manfred Rohde and Markus G{\"o}ker and Amrita Pati and Konstantinos Mavromatis and Amy Chen and Krishna Palaniappan and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia C.} and Thomas Brettin and Detter, {John C.} and Cliff Han and Patrick Chain and Tindall, {Brian J.} and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
note = "Funding Information: We gratefully acknowledge the help of Marlen Jando for growing A. mirum cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National",
year = "2009",
doi = "10.4056/sigs.21137",
language = "English",
volume = "1",
pages = "46--53",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Actinosynnema mirum type strain (101 T)

AU - Land, Miriam

AU - Lapidus, Alla

AU - Mayilraj, Shanmugam

AU - Chen, Feng

AU - Copeland, Alex

AU - del Rio, Tijana Glavina

AU - Nolan, Matt

AU - Lucas, Susan

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Chertkov, Olga

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Rohde, Manfred

AU - Göker, Markus

AU - Pati, Amrita

AU - Mavromatis, Konstantinos

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia C.

AU - Brettin, Thomas

AU - Detter, John C.

AU - Han, Cliff

AU - Chain, Patrick

AU - Tindall, Brian J.

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

N1 - Funding Information: We gratefully acknowledge the help of Marlen Jando for growing A. mirum cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National

PY - 2009

Y1 - 2009

N2 - Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino- synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo- nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO 2 atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein- coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino- synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo- nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO 2 atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein- coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Actinosynnemataceae

KW - Aerial and substrate mycelium

KW - Aerobic

KW - Mesophile

KW - Motile spores

KW - Nocardicin a producer

KW - Soluble pigments

KW - Synnemata

UR - http://www.scopus.com/inward/record.url?scp=78649840698&partnerID=8YFLogxK

U2 - 10.4056/sigs.21137

DO - 10.4056/sigs.21137

M3 - Article

AN - SCOPUS:78649840698

VL - 1

SP - 46

EP - 53

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 90133961