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New pericentromeric repeat identified in the genome of japanese quail. / Kulak, Maria M. ; Dyomin, Alexander G. ; Komissarov , Aleksei S. ; Fillon, Valerie ; Saifitdinova, Alsu F. ; Pavlova , Olga A. ; Galkina, Svetlana A. ; Gaginskaya, Elena R. .

In: Comparative Cytogenetics, Vol. 12, No. 3, P11, 2018, p. 337-338.

Research output: Contribution to journal › Meeting Abstract › peer-review

Harvard

Kulak, MM, Dyomin, AG, Komissarov , AS, Fillon, V, Saifitdinova, AF, Pavlova , OA, Galkina, SA & Gaginskaya, ER 2018, 'New pericentromeric repeat identified in the genome of japanese quail', Comparative Cytogenetics, vol. 12, no. 3, P11, pp. 337-338.

APA

Kulak, M. M., Dyomin, A. G., Komissarov , A. S., Fillon, V., Saifitdinova, A. F., Pavlova , O. A., Galkina, S. A., & Gaginskaya, E. R. (2018). New pericentromeric repeat identified in the genome of japanese quail. Comparative Cytogenetics, 12(3), 337-338. [P11].

Vancouver

Kulak MM, Dyomin AG, Komissarov AS, Fillon V, Saifitdinova AF, Pavlova OA et al. New pericentromeric repeat identified in the genome of japanese quail. Comparative Cytogenetics. 2018;12(3):337-338. P11.

Author

Kulak, Maria M. ; Dyomin, Alexander G. ; Komissarov , Aleksei S. ; Fillon, Valerie ; Saifitdinova, Alsu F. ; Pavlova , Olga A. ; Galkina, Svetlana A. ; Gaginskaya, Elena R. . / New pericentromeric repeat identified in the genome of japanese quail. In: Comparative Cytogenetics. 2018 ; Vol. 12, No. 3. pp. 337-338.

BibTeX

@article{8163bd1b00b24b598997a1e0ee1b0a70,
title = "New pericentromeric repeat identified in the genome of japanese quail",
abstract = "Pericentromeres are obligate structural chromosomal parts that guarantee proper chromosome segregation during cell division. Pericentromeric regions of many eukaryotes are enriched in tandem repeats, therefore they are the most difficult genome elements to analyze. The genome of Japanese quail Coturnix japonica Temminck et Schlegel, 1849, the species used in biomedical research and poultry farming, is relatively small (≈1.41 Gb) and packed into 39 chromosome pairs. 41-bp tandem repeats PO41 and BglII are found in centromere regions of CJA4, CJAW and some quail microchromosomes. Here we report the deciphering of a new tandem repeat CjapSAT found within unassembled Japanese quail short raw reads (GeneBank accession number MH475922). In C. japonica genome there are several degenerated and truncated CjapSAT variants with basic repeat unit around 1180 bp and average A+T content of 68%. The Cjap-SAT repeat is specific to Japanese quail and is not found in any other avian genomes.",
author = "Kulak, {Maria M.} and Dyomin, {Alexander G.} and Komissarov, {Aleksei S.} and Valerie Fillon and Saifitdinova, {Alsu F.} and Pavlova, {Olga A.} and Galkina, {Svetlana A.} and Gaginskaya, {Elena R.}",
year = "2018",
language = "English",
volume = "12",
pages = "337--338",
journal = "Comparative Cytogenetics",
issn = "1993-0771",
publisher = "Pensoft Publishers",
number = "3",
note = "null ; Conference date: 09-06-2016 Through 12-06-2018",
url = "https://icacg2018.ru/",

}

RIS

TY - JOUR

T1 - New pericentromeric repeat identified in the genome of japanese quail

AU - Kulak, Maria M.

AU - Dyomin, Alexander G.

AU - Komissarov , Aleksei S.

AU - Fillon, Valerie

AU - Saifitdinova, Alsu F.

AU - Pavlova , Olga A.

AU - Galkina, Svetlana A.

AU - Gaginskaya, Elena R.

PY - 2018

Y1 - 2018

N2 - Pericentromeres are obligate structural chromosomal parts that guarantee proper chromosome segregation during cell division. Pericentromeric regions of many eukaryotes are enriched in tandem repeats, therefore they are the most difficult genome elements to analyze. The genome of Japanese quail Coturnix japonica Temminck et Schlegel, 1849, the species used in biomedical research and poultry farming, is relatively small (≈1.41 Gb) and packed into 39 chromosome pairs. 41-bp tandem repeats PO41 and BglII are found in centromere regions of CJA4, CJAW and some quail microchromosomes. Here we report the deciphering of a new tandem repeat CjapSAT found within unassembled Japanese quail short raw reads (GeneBank accession number MH475922). In C. japonica genome there are several degenerated and truncated CjapSAT variants with basic repeat unit around 1180 bp and average A+T content of 68%. The Cjap-SAT repeat is specific to Japanese quail and is not found in any other avian genomes.

AB - Pericentromeres are obligate structural chromosomal parts that guarantee proper chromosome segregation during cell division. Pericentromeric regions of many eukaryotes are enriched in tandem repeats, therefore they are the most difficult genome elements to analyze. The genome of Japanese quail Coturnix japonica Temminck et Schlegel, 1849, the species used in biomedical research and poultry farming, is relatively small (≈1.41 Gb) and packed into 39 chromosome pairs. 41-bp tandem repeats PO41 and BglII are found in centromere regions of CJA4, CJAW and some quail microchromosomes. Here we report the deciphering of a new tandem repeat CjapSAT found within unassembled Japanese quail short raw reads (GeneBank accession number MH475922). In C. japonica genome there are several degenerated and truncated CjapSAT variants with basic repeat unit around 1180 bp and average A+T content of 68%. The Cjap-SAT repeat is specific to Japanese quail and is not found in any other avian genomes.

UR - https://hal.archives-ouvertes.fr/hal-02734340/

UR - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6182297/pdf/comparative_cytogenetics-12-299.pdf

M3 - Meeting Abstract

VL - 12

SP - 337

EP - 338

JO - Comparative Cytogenetics

JF - Comparative Cytogenetics

SN - 1993-0771

IS - 3

M1 - P11

Y2 - 9 June 2016 through 12 June 2018

ER -

ID: 94124402