Research output: Contribution to journal › Article › peer-review
New horizons of adenosinetriphosphate energetics arising from interaction with magnesium cofactor. / Tulub, Alexander A.; Stefanov, V. E.
In: European Biophysics Journal, Vol. 37, No. 8, 01.10.2008, p. 1309-1316.Research output: Contribution to journal › Article › peer-review
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TY - JOUR
T1 - New horizons of adenosinetriphosphate energetics arising from interaction with magnesium cofactor
AU - Tulub, Alexander A.
AU - Stefanov, V. E.
PY - 2008/10/1
Y1 - 2008/10/1
N2 - MD DFT:B3LYP (6-31G*z.ast;basis set, T = 310 K) method is used to study interactions [singlet (S) and triplet (T) reaction paths] between adenosinetriphosphate, ATP4-, and [Mg(H2O) 6]2+ in water environment, modeled with 78 water molecules. Computations reveal the appearance of low and high-energy states (stable, quasi-stable, and unstable), assigned to different spin symmetries. At the initial stage of interaction, ATP donates a part of its negative charge to the Mg complex making the Mg slightly charged. As a result, the original octahedral Mg complex loses two (S state) or four (T state) water molecules. Moving along S or T potential energy surfaces (PESs), Mg(H2O) 4 or Mg(H2O)2 display different ways of complexation with ATP. S path favors the formation of a stable chelate with the O1-O2 fragment of ATP triphosphate tail, whereas T path favors producing a single-bonded complex with the O2. The latter, being unstable, undergoes a further conversion into a spin-separated complex, also unstable, and two metastable S complexes, which finally arise in two stable, low-energy and high-energy, chelates. The spin-separated complex experiences rapid decomposition resulting in the production of a highly reactive adenosinemonophosphate ion-radical •AMP, early observed in the CIDNP experiment (Tulub 2006). Biological consequences of the findings are discussed.
AB - MD DFT:B3LYP (6-31G*z.ast;basis set, T = 310 K) method is used to study interactions [singlet (S) and triplet (T) reaction paths] between adenosinetriphosphate, ATP4-, and [Mg(H2O) 6]2+ in water environment, modeled with 78 water molecules. Computations reveal the appearance of low and high-energy states (stable, quasi-stable, and unstable), assigned to different spin symmetries. At the initial stage of interaction, ATP donates a part of its negative charge to the Mg complex making the Mg slightly charged. As a result, the original octahedral Mg complex loses two (S state) or four (T state) water molecules. Moving along S or T potential energy surfaces (PESs), Mg(H2O) 4 or Mg(H2O)2 display different ways of complexation with ATP. S path favors the formation of a stable chelate with the O1-O2 fragment of ATP triphosphate tail, whereas T path favors producing a single-bonded complex with the O2. The latter, being unstable, undergoes a further conversion into a spin-separated complex, also unstable, and two metastable S complexes, which finally arise in two stable, low-energy and high-energy, chelates. The spin-separated complex experiences rapid decomposition resulting in the production of a highly reactive adenosinemonophosphate ion-radical •AMP, early observed in the CIDNP experiment (Tulub 2006). Biological consequences of the findings are discussed.
KW - ATP
KW - MD DFT
KW - Mg complexes
UR - http://www.scopus.com/inward/record.url?scp=51849102857&partnerID=8YFLogxK
U2 - 10.1007/s00249-008-0337-5
DO - 10.1007/s00249-008-0337-5
M3 - Article
C2 - 18463860
AN - SCOPUS:51849102857
VL - 37
SP - 1309
EP - 1316
JO - European Biophysics Journal
JF - European Biophysics Journal
SN - 0175-7571
IS - 8
ER -
ID: 48561778