Research output: Contribution to journal › Article › peer-review
Mitochondrial genome of Vannella croatica (Amoebozoa, Discosea, Vannellida). / Бондаренко, Наталья Ивановна; Насонова, Елена Станиславовна; Миянович, Оля; Глотова, Анна Андреевна; Камышацкая, Оксана Геннадьевна; Кудрявцев, Александр Александрович; Машарский, Алексей Эльвинович; Полев, Дмитрий Евгеньевич; Смирнов, Алексей Валерьевич.
In: Journal of Eukaryotic Microbiology, Vol. 65, No. 6, 01.11.2018, p. 820-827.Research output: Contribution to journal › Article › peer-review
}
TY - JOUR
T1 - Mitochondrial genome of Vannella croatica (Amoebozoa, Discosea, Vannellida).
AU - Бондаренко, Наталья Ивановна
AU - Насонова, Елена Станиславовна
AU - Миянович, Оля
AU - Глотова, Анна Андреевна
AU - Камышацкая, Оксана Геннадьевна
AU - Кудрявцев, Александр Александрович
AU - Машарский, Алексей Эльвинович
AU - Полев, Дмитрий Евгеньевич
AU - Смирнов, Алексей Валерьевич
N1 - Funding Information: Supported with the Russian Science Foundation 14-14-00474 grant (AS - concept, PFGE, and molecular studies), SPSU postdoc project 1.50.1040.2014 (NB - culturing and collection of amoebae biomass), and RFBR project 16-34-60111 (NB - bioinformatics). This study utilized equipment of the Core Facilities Centers “Culture Collection of Microorganisms”, “Development of Molecular and Cell Technologies”, and “Computing Centre SPbU” of Saint-Petersburg State University.
PY - 2018/11/1
Y1 - 2018/11/1
N2 - Mitochondrial genome sequence of Vannella croatica (Amoebozoa, Discosea, Vannellida) was obtained using pulse-field gel electrophoretic isolation of the circular mitochondrial DNA, followed by the next-generation sequencing. The mitochondrial DNA of this species has the length of 28,933 bp and contains 12 protein-coding genes, two ribosomal RNAs, and 16 transfer RNAs. Vannella croatica mitochondrial genome is relatively short compared to other known amoebozoan mitochondrial genomes but is rather gene-rich and contains significant number of open reading frames.
AB - Mitochondrial genome sequence of Vannella croatica (Amoebozoa, Discosea, Vannellida) was obtained using pulse-field gel electrophoretic isolation of the circular mitochondrial DNA, followed by the next-generation sequencing. The mitochondrial DNA of this species has the length of 28,933 bp and contains 12 protein-coding genes, two ribosomal RNAs, and 16 transfer RNAs. Vannella croatica mitochondrial genome is relatively short compared to other known amoebozoan mitochondrial genomes but is rather gene-rich and contains significant number of open reading frames.
KW - Amoebozoa
KW - Gene order
KW - Vannellidae
KW - mitochondrial DNA
UR - http://www.scopus.com/inward/record.url?scp=85046423893&partnerID=8YFLogxK
U2 - 10.1111/jeu.12523
DO - 10.1111/jeu.12523
M3 - Article
VL - 65
SP - 820
EP - 827
JO - Journal of Eukaryotic Microbiology
JF - Journal of Eukaryotic Microbiology
SN - 1066-5234
IS - 6
ER -
ID: 10172039