DOI

  • Evgeny I. Bakhmet
  • Igor B. Nazarov
  • Adel R. Gazizova
  • Nadezhda E. Vorobyeva
  • Andrey A. Kuzmin
  • Mikhail N. Gordeev
  • Sergey A. Sinenko
  • Nikolai D. Aksenov
  • Tatyana O. Artamonova
  • Mikhail A. Khodorkovskii
  • Natalia Alenina
  • Daria Onichtchouk
  • Guangming Wu
  • Hans R. Schöler
  • Alexey N. Tomilin

The transcription factor Oct4 plays a key regulatory role in the induction and maintenance of cellular pluripotency. In this article, we show that ubiquitous and multifunctional poly(C) DNA/RNA-binding protein hnRNP-K occupies Oct4 (Pou5f1) enhancers in embryonic stem cells (ESCs) but is dispensable for the initiation, maintenance, and downregulation of Oct4 gene expression. Nevertheless, hnRNP-K has an essential cell-autonomous function in ESCs to maintain their proliferation and viability. To better understand mechanisms of hnRNP-K action in ESCs, we have performed ChIP-seq analysis of genome-wide binding of hnRNP-K and identified several thousands of hnRNP-K target sites that are frequently co-occupied by pluripotency-related and common factors (Oct4, TATA-box binding protein, Sox2, Nanog, Otx2, etc.), as well as active histone marks. Furthermore, hnRNP-K localizes exclusively within open chromatin, implying its role in the onset and/or maintenance of this chromatin state. Stem Cells 2019;37:1018–1029.

Original languageEnglish
Pages (from-to)1018-1029
Number of pages12
JournalStem Cells
Volume37
Issue number8
DOIs
StatePublished - Aug 2019

    Scopus subject areas

  • Molecular Medicine
  • Developmental Biology
  • Cell Biology

    Research areas

  • Chromatin, Histone code, hnRNP-K, Oct4, Pluripotent stem cells, Pou5f1

ID: 50500760