Standard

High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2<sup>T</sup> (DSM 21788<sup>T</sup>), a valuable source of polysaccharide decomposing enzymes. / Hahnke, R.L.; Stackebrandt, E.; Meier-Kolthoff, J.P.; Tindall, B.J.; Huang, S.; Rohde, M.; Lapidus, A.; Han, J.; Trong, S.; Haynes, M.; Reddy, T.B.K.; Huntemann, M.; Pati, A.; Ivanova, N.N.; Mavromatis, K.; Markowitz, V.; Woyke, T.; Göker, M.; Kyrpides, N.C.; Klenk, H.-P.

In: Standards in Genomic Sciences, No. JULY2015, 2015.

Research output: Contribution to journal › Article

Harvard

Hahnke, RL, Stackebrandt, E, Meier-Kolthoff, JP, Tindall, BJ, Huang, S, Rohde, M, Lapidus, A, Han, J, Trong, S, Haynes, M, Reddy, TBK, Huntemann, M, Pati, A, Ivanova, NN, Mavromatis, K, Markowitz, V, Woyke, T, Göker, M, Kyrpides, NC & Klenk, H-P 2015, 'High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2<sup>T</sup> (DSM 21788<sup>T</sup>), a valuable source of polysaccharide decomposing enzymes', Standards in Genomic Sciences, no. JULY2015. https://doi.org/10.1186/s40793-015-0032-y

APA

Hahnke, R. L., Stackebrandt, E., Meier-Kolthoff, J. P., Tindall, B. J., Huang, S., Rohde, M., Lapidus, A., Han, J., Trong, S., Haynes, M., Reddy, T. B. K., Huntemann, M., Pati, A., Ivanova, N. N., Mavromatis, K., Markowitz, V., Woyke, T., Göker, M., Kyrpides, N. C., & Klenk, H-P. (2015). High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2<sup>T</sup> (DSM 21788<sup>T</sup>), a valuable source of polysaccharide decomposing enzymes. Standards in Genomic Sciences, (JULY2015). https://doi.org/10.1186/s40793-015-0032-y

Vancouver

Hahnke RL, Stackebrandt E, Meier-Kolthoff JP, Tindall BJ, Huang S, Rohde M et al. High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2<sup>T</sup> (DSM 21788<sup>T</sup>), a valuable source of polysaccharide decomposing enzymes. Standards in Genomic Sciences. 2015;(JULY2015). https://doi.org/10.1186/s40793-015-0032-y

Author

Hahnke, R.L. ; Stackebrandt, E. ; Meier-Kolthoff, J.P. ; Tindall, B.J. ; Huang, S. ; Rohde, M. ; Lapidus, A. ; Han, J. ; Trong, S. ; Haynes, M. ; Reddy, T.B.K. ; Huntemann, M. ; Pati, A. ; Ivanova, N.N. ; Mavromatis, K. ; Markowitz, V. ; Woyke, T. ; Göker, M. ; Kyrpides, N.C. ; Klenk, H.-P. / High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2<sup>T</sup> (DSM 21788<sup>T</sup>), a valuable source of polysaccharide decomposing enzymes. In: Standards in Genomic Sciences. 2015 ; No. JULY2015.

BibTeX

@article{7d7d85814ff24133a3db0b765e348be6,
title = "High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes",
abstract = "{\textcopyright} 2015 Hahnke et al.Flavobacterium rivuli Ali et al. 2009 emend. Dong et al. 2013 is one of about 100 species in the genus Flavobacterium (family Flavobacteriacae, phylum Bacteroidetes) with a validly published name, and has been isolated from the spring of a hard water rivulet in Northern Germany. Including all type strains of the genus Myroides and Flavobacterium into the 16S rRNA gene sequence phylogeny revealed a clustering of members of the genus Myroides as a monophyletic group within the genus Flavobacterium. Furthermore, F. rivuli WB 3.3-2T and its next relatives seem more closely related to the genus Myroides than to the type species of the genus Flavobacterium, F. aquatile. The 4,489,248 bp long genome with its 3,391 protein-coding and 65 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. The genome of F. rivuli has almost as many genes encoding carbohydrate active enzymes (151 CAZymes) as genes encoding peptidases (177). Peptidases comprised mostly metallo (M)",
author = "R.L. Hahnke and E. Stackebrandt and J.P. Meier-Kolthoff and B.J. Tindall and S. Huang and M. Rohde and A. Lapidus and J. Han and S. Trong and M. Haynes and T.B.K. Reddy and M. Huntemann and A. Pati and N.N. Ivanova and K. Mavromatis and V. Markowitz and T. Woyke and M. G{\"o}ker and N.C. Kyrpides and H.-P. Klenk",
year = "2015",
doi = "10.1186/s40793-015-0032-y",
language = "English",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "JULY2015",

}

RIS

TY - JOUR

T1 - High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes

AU - Hahnke, R.L.

AU - Stackebrandt, E.

AU - Meier-Kolthoff, J.P.

AU - Tindall, B.J.

AU - Huang, S.

AU - Rohde, M.

AU - Lapidus, A.

AU - Han, J.

AU - Trong, S.

AU - Haynes, M.

AU - Reddy, T.B.K.

AU - Huntemann, M.

AU - Pati, A.

AU - Ivanova, N.N.

AU - Mavromatis, K.

AU - Markowitz, V.

AU - Woyke, T.

AU - Göker, M.

AU - Kyrpides, N.C.

AU - Klenk, H.-P.

PY - 2015

Y1 - 2015

N2 - © 2015 Hahnke et al.Flavobacterium rivuli Ali et al. 2009 emend. Dong et al. 2013 is one of about 100 species in the genus Flavobacterium (family Flavobacteriacae, phylum Bacteroidetes) with a validly published name, and has been isolated from the spring of a hard water rivulet in Northern Germany. Including all type strains of the genus Myroides and Flavobacterium into the 16S rRNA gene sequence phylogeny revealed a clustering of members of the genus Myroides as a monophyletic group within the genus Flavobacterium. Furthermore, F. rivuli WB 3.3-2T and its next relatives seem more closely related to the genus Myroides than to the type species of the genus Flavobacterium, F. aquatile. The 4,489,248 bp long genome with its 3,391 protein-coding and 65 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. The genome of F. rivuli has almost as many genes encoding carbohydrate active enzymes (151 CAZymes) as genes encoding peptidases (177). Peptidases comprised mostly metallo (M)

AB - © 2015 Hahnke et al.Flavobacterium rivuli Ali et al. 2009 emend. Dong et al. 2013 is one of about 100 species in the genus Flavobacterium (family Flavobacteriacae, phylum Bacteroidetes) with a validly published name, and has been isolated from the spring of a hard water rivulet in Northern Germany. Including all type strains of the genus Myroides and Flavobacterium into the 16S rRNA gene sequence phylogeny revealed a clustering of members of the genus Myroides as a monophyletic group within the genus Flavobacterium. Furthermore, F. rivuli WB 3.3-2T and its next relatives seem more closely related to the genus Myroides than to the type species of the genus Flavobacterium, F. aquatile. The 4,489,248 bp long genome with its 3,391 protein-coding and 65 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. The genome of F. rivuli has almost as many genes encoding carbohydrate active enzymes (151 CAZymes) as genes encoding peptidases (177). Peptidases comprised mostly metallo (M)

U2 - 10.1186/s40793-015-0032-y

DO - 10.1186/s40793-015-0032-y

M3 - Article

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - JULY2015

ER -

ID: 4008582