Standard

Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t). / Lapidus, Alla; Chertkov, Olga; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Huntemann, Marcel; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne Marie; Rohde, Manfred; Abt, Birte; Spring, Stefan; Göker, Markus; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Woyke, Tanja.

In: Standards in Genomic Sciences, Vol. 5, No. 1, 28.10.2011, p. 86-96.

Research output: Contribution to journal › Article › peer-review

Harvard

Lapidus, A, Chertkov, O, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Huntemann, M, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Brambilla, EM, Rohde, M, Abt, B, Spring, S, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Woyke, T 2011, 'Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t)', Standards in Genomic Sciences, vol. 5, no. 1, pp. 86-96. https://doi.org/10.4056/sigs.2235024

APA

Lapidus, A., Chertkov, O., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Huntemann, M., Mavromatis, K., Pati, A., Chen, A., Palaniappan, K., Land, M., ... Woyke, T. (2011). Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t). Standards in Genomic Sciences, 5(1), 86-96. https://doi.org/10.4056/sigs.2235024

Vancouver

Lapidus A, Chertkov O, Nolan M, Lucas S, Hammon N, Deshpande S et al. Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t). Standards in Genomic Sciences. 2011 Oct 28;5(1):86-96. https://doi.org/10.4056/sigs.2235024

Author

Lapidus, Alla ; Chertkov, Olga ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxanne ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Huntemann, Marcel ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Brambilla, Evelyne Marie ; Rohde, Manfred ; Abt, Birte ; Spring, Stefan ; Göker, Markus ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Woyke, Tanja. / Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t). In: Standards in Genomic Sciences. 2011 ; Vol. 5, No. 1. pp. 86-96.

BibTeX

@article{b1f7e35bb2fc4ca8abacab8bd205a561,
title = "Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t)",
abstract = "Flexistipes sinusarabici Fiala et al. 2000 is the type species of the genus Flexistipes in the fami-ly Deferribacteraceae. The species is of interest because of its isolated phylogenetic location in a genomically under-characterized region of the tree of life, and because of its origin from a multiply extreme environment; the Atlantis Deep brines of the Red Sea, where it had to struggle with high temperatures, high salinity, and a high concentrations of heavy metals. This is the fourth completed genome sequence to be published of a type strain of the family Deferribacteraceae. The 2,526,590 bp long genome with its 2,346 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Brine, Deferribacteraceae, Geba, Gram-negative, Heterotrophic, Marine, Moderately thermo-philic, Non-motile, Strictly anaerobic",
author = "Alla Lapidus and Olga Chertkov and Matt Nolan and Susan Lucas and Nancy Hammon and Shweta Deshpande and Cheng, {Jan Fang} and Roxanne Tapia and Cliff Han and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Marcel Huntemann and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Brambilla, {Evelyne Marie} and Manfred Rohde and Birte Abt and Stefan Spring and Markus G{\"o}ker and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Tanja Woyke",
year = "2011",
month = oct,
day = "28",
doi = "10.4056/sigs.2235024",
language = "English",
volume = "5",
pages = "86--96",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10t)

AU - Lapidus, Alla

AU - Chertkov, Olga

AU - Nolan, Matt

AU - Lucas, Susan

AU - Hammon, Nancy

AU - Deshpande, Shweta

AU - Cheng, Jan Fang

AU - Tapia, Roxanne

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Pagani, Ioanna

AU - Huntemann, Marcel

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Brambilla, Evelyne Marie

AU - Rohde, Manfred

AU - Abt, Birte

AU - Spring, Stefan

AU - Göker, Markus

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Woyke, Tanja

PY - 2011/10/28

Y1 - 2011/10/28

N2 - Flexistipes sinusarabici Fiala et al. 2000 is the type species of the genus Flexistipes in the fami-ly Deferribacteraceae. The species is of interest because of its isolated phylogenetic location in a genomically under-characterized region of the tree of life, and because of its origin from a multiply extreme environment; the Atlantis Deep brines of the Red Sea, where it had to struggle with high temperatures, high salinity, and a high concentrations of heavy metals. This is the fourth completed genome sequence to be published of a type strain of the family Deferribacteraceae. The 2,526,590 bp long genome with its 2,346 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Flexistipes sinusarabici Fiala et al. 2000 is the type species of the genus Flexistipes in the fami-ly Deferribacteraceae. The species is of interest because of its isolated phylogenetic location in a genomically under-characterized region of the tree of life, and because of its origin from a multiply extreme environment; the Atlantis Deep brines of the Red Sea, where it had to struggle with high temperatures, high salinity, and a high concentrations of heavy metals. This is the fourth completed genome sequence to be published of a type strain of the family Deferribacteraceae. The 2,526,590 bp long genome with its 2,346 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Brine

KW - Deferribacteraceae

KW - Geba

KW - Gram-negative

KW - Heterotrophic

KW - Marine

KW - Moderately thermo-philic

KW - Non-motile

KW - Strictly anaerobic

UR - http://www.scopus.com/inward/record.url?scp=80054865547&partnerID=8YFLogxK

U2 - 10.4056/sigs.2235024

DO - 10.4056/sigs.2235024

M3 - Article

AN - SCOPUS:80054865547

VL - 5

SP - 86

EP - 96

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 36861479