Standard

Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). / Anderson, Iain; Munk, Christine; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Tice, Hope; Del Rio, Tijana Glavina; Cheng, Jan Fang; Han, Cliff; Tapia, Roxanne; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pagani, Ioanna; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Rohde, Manfred; Tindall, Brian J.; Göker, Markus; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Ivanova, Natalia.

In: Standards in Genomic Sciences, Vol. 7, No. 2, 01.12.2012, p. 210-220.

Research output: Contribution to journal › Article › peer-review

Harvard

Anderson, I, Munk, C, Lapidus, A, Nolan, M, Lucas, S, Tice, H, Del Rio, TG, Cheng, JF, Han, C, Tapia, R, Goodwin, L, Pitluck, S, Liolios, K, Mavromatis, K, Pagani, I, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Rohde, M, Tindall, BJ, Göker, M, Detter, JC, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Ivanova, N 2012, 'Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)', Standards in Genomic Sciences, vol. 7, no. 2, pp. 210-220. https://doi.org/10.4056/sigs.3117229

APA

Anderson, I., Munk, C., Lapidus, A., Nolan, M., Lucas, S., Tice, H., Del Rio, T. G., Cheng, J. F., Han, C., Tapia, R., Goodwin, L., Pitluck, S., Liolios, K., Mavromatis, K., Pagani, I., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., ... Ivanova, N. (2012). Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). Standards in Genomic Sciences, 7(2), 210-220. https://doi.org/10.4056/sigs.3117229

Vancouver

Anderson I, Munk C, Lapidus A, Nolan M, Lucas S, Tice H et al. Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). Standards in Genomic Sciences. 2012 Dec 1;7(2):210-220. https://doi.org/10.4056/sigs.3117229

Author

Anderson, Iain ; Munk, Christine ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Tice, Hope ; Del Rio, Tijana Glavina ; Cheng, Jan Fang ; Han, Cliff ; Tapia, Roxanne ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Pagani, Ioanna ; Mikhailova, Natalia ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Rohde, Manfred ; Tindall, Brian J. ; Göker, Markus ; Detter, John C. ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Ivanova, Natalia. / Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). In: Standards in Genomic Sciences. 2012 ; Vol. 7, No. 2. pp. 210-220.

BibTeX

@article{d3ce81b10c6345e5973c094bae3e3465,
title = "Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)",
abstract = "Niabella soli Weon et al. 2008 is a member of the Chitinophagaceae, a family within the class Sphingobacteriia that is poorly characterized at the genome level, thus far. N. soli strain JS13-8T is of interest for its ability to produce a variety of glycosyl hydrolases. The ge-nome of N. soli strain JS13-8T is only the second genome sequence of a type strain from the family Chitinophagaceae to be published, and the first one from the genus Niabella. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,697,343 bp long chromosome with its 3,931 protein-coding and 49 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Chemoorganotrophic, Chitinophagaceae, GEBA, Glycosyl hydrolases, Gram-negative, Mesophilic, Non-motile, Soil",
author = "Iain Anderson and Christine Munk and Alla Lapidus and Matt Nolan and Susan Lucas and Hope Tice and {Del Rio}, {Tijana Glavina} and Cheng, {Jan Fang} and Cliff Han and Roxanne Tapia and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Konstantinos Mavromatis and Ioanna Pagani and Natalia Mikhailova and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Manfred Rohde and Tindall, {Brian J.} and Markus G{\"o}ker and Detter, {John C.} and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Natalia Ivanova",
year = "2012",
month = dec,
day = "1",
doi = "10.4056/sigs.3117229",
language = "English",
volume = "7",
pages = "210--220",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "2",

}

RIS

TY - JOUR

T1 - Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)

AU - Anderson, Iain

AU - Munk, Christine

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Lucas, Susan

AU - Tice, Hope

AU - Del Rio, Tijana Glavina

AU - Cheng, Jan Fang

AU - Han, Cliff

AU - Tapia, Roxanne

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Mavromatis, Konstantinos

AU - Pagani, Ioanna

AU - Mikhailova, Natalia

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Rohde, Manfred

AU - Tindall, Brian J.

AU - Göker, Markus

AU - Detter, John C.

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Ivanova, Natalia

PY - 2012/12/1

Y1 - 2012/12/1

N2 - Niabella soli Weon et al. 2008 is a member of the Chitinophagaceae, a family within the class Sphingobacteriia that is poorly characterized at the genome level, thus far. N. soli strain JS13-8T is of interest for its ability to produce a variety of glycosyl hydrolases. The ge-nome of N. soli strain JS13-8T is only the second genome sequence of a type strain from the family Chitinophagaceae to be published, and the first one from the genus Niabella. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,697,343 bp long chromosome with its 3,931 protein-coding and 49 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Niabella soli Weon et al. 2008 is a member of the Chitinophagaceae, a family within the class Sphingobacteriia that is poorly characterized at the genome level, thus far. N. soli strain JS13-8T is of interest for its ability to produce a variety of glycosyl hydrolases. The ge-nome of N. soli strain JS13-8T is only the second genome sequence of a type strain from the family Chitinophagaceae to be published, and the first one from the genus Niabella. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,697,343 bp long chromosome with its 3,931 protein-coding and 49 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Chemoorganotrophic

KW - Chitinophagaceae

KW - GEBA

KW - Glycosyl hydrolases

KW - Gram-negative

KW - Mesophilic

KW - Non-motile

KW - Soil

UR - http://www.scopus.com/inward/record.url?scp=84872044106&partnerID=8YFLogxK

U2 - 10.4056/sigs.3117229

DO - 10.4056/sigs.3117229

M3 - Article

AN - SCOPUS:84872044106

VL - 7

SP - 210

EP - 220

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 2

ER -

ID: 36792933