Thematic virtual museum system main goal is providing more relevant information based on user characteristic, behavior and desire. Thematic exhibition as main unique feature very considering on users' whole activities. Barry and Maria define creation of new knowledge, transformative and self-directed experiences, engagement with the full diversity of visitors, and transparency as the source of a viewpoint of the exhibition as museum specific evaluation criteria. Museum exhibition is not book on the wall rather than leading visitors to new attitudes, values and ideas even in very different cultural backgrounds or religious beliefs. The system with interactive information in the thematic exhibition which has been processing and delivering to the user will be leading to the better understanding by traveling in similar fields. In order to accomplish those tasks, this research have been performed and constructed thematic virtual museums inverted index to gain fastest retrieval document collections. The system is using special architecture and multi system indexing in thematic virtual museum inverted index. This index can manage collection in many forms of data structured, semi structured or unstructured which have processed by data access layer engine. In this paper showed a design and modification of the inverted index experimental result for thematic virtual museums system and a sample of exhibition visualization to get more precision by embedding method.