Standard

Complete genome sequence of Veillonella parvula type strain (Te3 T). / Gronow, Sabine; Welnitz, Sabine; Lapidus, Alla; Nolan, Matt; del Rio, Tijana Glavina; Copeland, Alex; Chen, Feng; Tice, Hope; Pitluck, Sam; Cheng, Jan Fang; Saunders, Elizabeth; Brettin, Thomas; Han, Cliff; Detter, John C.; Bruce, David; Goodwin, Lynne; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Pati, Amrita; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Chain, Patrick; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lucas, Susan.

In: Standards in Genomic Sciences, Vol. 2, No. 1, 2010, p. 57-65.

Research output: Contribution to journal › Article › peer-review

Harvard

Gronow, S, Welnitz, S, Lapidus, A, Nolan, M, del Rio, TG, Copeland, A, Chen, F, Tice, H, Pitluck, S, Cheng, JF, Saunders, E, Brettin, T, Han, C, Detter, JC, Bruce, D, Goodwin, L, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Pati, A, Mavromatis, K, Chen, A, Palaniappan, K, Chain, P, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lucas, S 2010, 'Complete genome sequence of Veillonella parvula type strain (Te3 T)', Standards in Genomic Sciences, vol. 2, no. 1, pp. 57-65. https://doi.org/10.4056/sigs.521107

APA

Gronow, S., Welnitz, S., Lapidus, A., Nolan, M., del Rio, T. G., Copeland, A., Chen, F., Tice, H., Pitluck, S., Cheng, J. F., Saunders, E., Brettin, T., Han, C., Detter, J. C., Bruce, D., Goodwin, L., Land, M., Hauser, L., Chang, Y. J., ... Lucas, S. (2010). Complete genome sequence of Veillonella parvula type strain (Te3 T). Standards in Genomic Sciences, 2(1), 57-65. https://doi.org/10.4056/sigs.521107

Vancouver

Gronow S, Welnitz S, Lapidus A, Nolan M, del Rio TG, Copeland A et al. Complete genome sequence of Veillonella parvula type strain (Te3 T). Standards in Genomic Sciences. 2010;2(1):57-65. https://doi.org/10.4056/sigs.521107

Author

Gronow, Sabine ; Welnitz, Sabine ; Lapidus, Alla ; Nolan, Matt ; del Rio, Tijana Glavina ; Copeland, Alex ; Chen, Feng ; Tice, Hope ; Pitluck, Sam ; Cheng, Jan Fang ; Saunders, Elizabeth ; Brettin, Thomas ; Han, Cliff ; Detter, John C. ; Bruce, David ; Goodwin, Lynne ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Pati, Amrita ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Chain, Patrick ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lucas, Susan. / Complete genome sequence of Veillonella parvula type strain (Te3 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 1. pp. 57-65.

BibTeX

@article{c90b7b316b1748569f49ba3803b79207,
title = "Complete genome sequence of Veillonella parvula type strain (Te3 T)",
abstract = "Veillonella parvula (Veillon and Zuber 1898) Pr{\'e}vot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3 T, the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Dental plaque, Human oral microflora, Intergeneric coaggregation, Methylmalonyl-CoA decarboxylase, Opportunistic infections, Veillonellaceae",
author = "Sabine Gronow and Sabine Welnitz and Alla Lapidus and Matt Nolan and {del Rio}, {Tijana Glavina} and Alex Copeland and Feng Chen and Hope Tice and Sam Pitluck and Cheng, {Jan Fang} and Elizabeth Saunders and Thomas Brettin and Cliff Han and Detter, {John C.} and David Bruce and Lynne Goodwin and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Amrita Pati and Konstantinos Mavromatis and Amy Chen and Krishna Palaniappan and Patrick Chain and Manfred Rohde and Markus G{\"o}ker and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Susan Lucas",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence",
year = "2010",
doi = "10.4056/sigs.521107",
language = "English",
volume = "2",
pages = "57--65",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Veillonella parvula type strain (Te3 T)

AU - Gronow, Sabine

AU - Welnitz, Sabine

AU - Lapidus, Alla

AU - Nolan, Matt

AU - del Rio, Tijana Glavina

AU - Copeland, Alex

AU - Chen, Feng

AU - Tice, Hope

AU - Pitluck, Sam

AU - Cheng, Jan Fang

AU - Saunders, Elizabeth

AU - Brettin, Thomas

AU - Han, Cliff

AU - Detter, John C.

AU - Bruce, David

AU - Goodwin, Lynne

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Pati, Amrita

AU - Mavromatis, Konstantinos

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Chain, Patrick

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Lucas, Susan

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence

PY - 2010

Y1 - 2010

N2 - Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3 T, the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3 T, the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Dental plaque

KW - Human oral microflora

KW - Intergeneric coaggregation

KW - Methylmalonyl-CoA decarboxylase

KW - Opportunistic infections

KW - Veillonellaceae

UR - http://www.scopus.com/inward/record.url?scp=80051664420&partnerID=8YFLogxK

U2 - 10.4056/sigs.521107

DO - 10.4056/sigs.521107

M3 - Article

AN - SCOPUS:80051664420

VL - 2

SP - 57

EP - 65

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 90014412