Standard
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T). / Chovatia, Mansi; Sikorski, Johannes; Schröder, Maren; Lapidus, Alla; Nolan, Matt; Tice, Hope; del Rio, Tijana Glavina; Copeland, Alex; Cheng, Jan Fang; Lucas, Susan; Chen, Feng; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Saunders, Elizabeth; Detter, John C.; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Spring, Stefan; Bristow, Jim; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Eisen, Jonathan A.
In:
Standards in Genomic Sciences, Vol. 1, No. 3, 2009, p. 254-261.
Research output: Contribution to journal › Article › peer-review
Harvard
Chovatia, M, Sikorski, J, Schröder, M
, Lapidus, A, Nolan, M, Tice, H, del Rio, TG, Copeland, A, Cheng, JF, Lucas, S, Chen, F, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Saunders, E, Detter, JC, Brettin, T, Rohde, M, Göker, M, Spring, S, Bristow, J, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Eisen, JA 2009, '
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T)',
Standards in Genomic Sciences, vol. 1, no. 3, pp. 254-261.
https://doi.org/10.4056/sigs.40645
APA
Chovatia, M., Sikorski, J., Schröder, M.
, Lapidus, A., Nolan, M., Tice, H., del Rio, T. G., Copeland, A., Cheng, J. F., Lucas, S., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., ... Eisen, J. A. (2009).
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T).
Standards in Genomic Sciences,
1(3), 254-261.
https://doi.org/10.4056/sigs.40645
Vancouver
Author
Chovatia, Mansi ; Sikorski, Johannes ; Schröder, Maren
; Lapidus, Alla ; Nolan, Matt ; Tice, Hope ; del Rio, Tijana Glavina ; Copeland, Alex ; Cheng, Jan Fang ; Lucas, Susan ; Chen, Feng ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Saunders, Elizabeth ; Detter, John C. ; Brettin, Thomas ; Rohde, Manfred ; Göker, Markus ; Spring, Stefan ; Bristow, Jim ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Eisen, Jonathan A. /
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T). In:
Standards in Genomic Sciences. 2009 ; Vol. 1, No. 3. pp. 254-261.
BibTeX
@article{087080bc826944408136317262b54e34,
title = "Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T)",
abstract = "Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883 T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Amino acid fermentation, Co-culture with methanobacterium thermoautotrophicum, Lithotrophic, Oxidative decarboxylation, Strictly anaerobic, Synergistales, Synergistetes, Thermophile",
author = "Mansi Chovatia and Johannes Sikorski and Maren Schr{\"o}der and Alla Lapidus and Matt Nolan and Hope Tice and {del Rio}, {Tijana Glavina} and Alex Copeland and Cheng, {Jan Fang} and Susan Lucas and Feng Chen and David Bruce and Lynne Goodwin and Sam Pitluck and Konstantinos Mavromatis and Galina Ovchinnikova and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Patrick Chain and Elizabeth Saunders and Detter, {John C.} and Thomas Brettin and Manfred Rohde and Markus G{\"o}ker and Stefan Spring and Jim Bristow and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Eisen, {Jonathan A.}",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence",
year = "2009",
doi = "10.4056/sigs.40645",
language = "English",
volume = "1",
pages = "254--261",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",
}
RIS
TY - JOUR
T1 - Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T)
AU - Chovatia, Mansi
AU - Sikorski, Johannes
AU - Schröder, Maren
AU - Lapidus, Alla
AU - Nolan, Matt
AU - Tice, Hope
AU - del Rio, Tijana Glavina
AU - Copeland, Alex
AU - Cheng, Jan Fang
AU - Lucas, Susan
AU - Chen, Feng
AU - Bruce, David
AU - Goodwin, Lynne
AU - Pitluck, Sam
AU - Mavromatis, Konstantinos
AU - Ovchinnikova, Galina
AU - Pati, Amrita
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Land, Miriam
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Chain, Patrick
AU - Saunders, Elizabeth
AU - Detter, John C.
AU - Brettin, Thomas
AU - Rohde, Manfred
AU - Göker, Markus
AU - Spring, Stefan
AU - Bristow, Jim
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
AU - Eisen, Jonathan A.
N1 - Funding Information:
We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence
PY - 2009
Y1 - 2009
N2 - Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883 T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883 T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - Amino acid fermentation
KW - Co-culture with methanobacterium thermoautotrophicum
KW - Lithotrophic
KW - Oxidative decarboxylation
KW - Strictly anaerobic
KW - Synergistales
KW - Synergistetes
KW - Thermophile
UR - http://www.scopus.com/inward/record.url?scp=80053350363&partnerID=8YFLogxK
U2 - 10.4056/sigs.40645
DO - 10.4056/sigs.40645
M3 - Article
AN - SCOPUS:80053350363
VL - 1
SP - 254
EP - 261
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 3
ER -