Standard

Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). / Han, Cliff; Gu, Wei; Zhang, Xiaojing; Lapidus, Alla; Nolan, Matt; Copeland, Alex; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Tapia, Roxane; Goodwin, Lynne; Pitluck, Sam; Pagani, Ioanna; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Schneider, Susanne; Rohde, Manfred; Göker, Markus; Pukall, Rüdiger; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Detter, John C.

In: Standards in Genomic Sciences, Vol. 3, No. 3, 2010, p. 337-345.

Research output: Contribution to journal › Article › peer-review

Harvard

Han, C, Gu, W, Zhang, X, Lapidus, A, Nolan, M, Copeland, A, Lucas, S, del Rio, TG, Tice, H, Cheng, JF, Tapia, R, Goodwin, L, Pitluck, S, Pagani, I, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Schneider, S, Rohde, M, Göker, M, Pukall, R, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Detter, JC 2010, 'Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T)', Standards in Genomic Sciences, vol. 3, no. 3, pp. 337-345. https://doi.org/10.4056/sigs.1373474

APA

Han, C., Gu, W., Zhang, X., Lapidus, A., Nolan, M., Copeland, A., Lucas, S., del Rio, T. G., Tice, H., Cheng, J. F., Tapia, R., Goodwin, L., Pitluck, S., Pagani, I., Mavromatis, K., Pati, A., Chen, A., Palaniappan, K., Land, M., ... Detter, J. C. (2010). Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). Standards in Genomic Sciences, 3(3), 337-345. https://doi.org/10.4056/sigs.1373474

Vancouver

Han C, Gu W, Zhang X, Lapidus A, Nolan M, Copeland A et al. Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). Standards in Genomic Sciences. 2010;3(3):337-345. https://doi.org/10.4056/sigs.1373474

Author

Han, Cliff ; Gu, Wei ; Zhang, Xiaojing ; Lapidus, Alla ; Nolan, Matt ; Copeland, Alex ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Cheng, Jan Fang ; Tapia, Roxane ; Goodwin, Lynne ; Pitluck, Sam ; Pagani, Ioanna ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Schneider, Susanne ; Rohde, Manfred ; Göker, Markus ; Pukall, Rüdiger ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Detter, John C. / Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). In: Standards in Genomic Sciences. 2010 ; Vol. 3, No. 3. pp. 337-345.

BibTeX

@article{db155cb5f1c74941a49fc9bf37691aae,
title = "Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T)",
abstract = "Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. marianensis is an aerobic, thermophilic marine bacterium, originally isolated from the deepest part in the western Pacific Ocean (Mariana Trench) at the depth of 10, 897 m. Interestingly, the taxonomic status of the genus has not been clarified until now. The genus Thermaerobacter may represent a very deep group within the Firmicutes or potentially a novel phylum. The 2,844,696 bp long genome with its 2,375 protein-coding and 60 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Chemoheterotrophic, Clostridiales, Deep-sea, Family incertae sedis XVII, GEBA, Gram-variable, None-motile, Strictly aerobic, Thermophilic",
author = "Cliff Han and Wei Gu and Xiaojing Zhang and Alla Lapidus and Matt Nolan and Alex Copeland and Susan Lucas and {del Rio}, {Tijana Glavina} and Hope Tice and Cheng, {Jan Fang} and Roxane Tapia and Lynne Goodwin and Sam Pitluck and Ioanna Pagani and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Susanne Schneider and Manfred Rohde and Markus G{\"o}ker and R{\"u}diger Pukall and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Detter, {John C.}",
note = "Funding Information: We would like to gratefully acknowledge the help of Gabriele Gehrich-Schr{\"o}ter (DSMZ) for growing T. ma-rianensis cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-",
year = "2010",
doi = "10.4056/sigs.1373474",
language = "English",
volume = "3",
pages = "337--345",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "3",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T)

AU - Han, Cliff

AU - Gu, Wei

AU - Zhang, Xiaojing

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Copeland, Alex

AU - Lucas, Susan

AU - del Rio, Tijana Glavina

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Tapia, Roxane

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Pagani, Ioanna

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Schneider, Susanne

AU - Rohde, Manfred

AU - Göker, Markus

AU - Pukall, Rüdiger

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Detter, John C.

N1 - Funding Information: We would like to gratefully acknowledge the help of Gabriele Gehrich-Schröter (DSMZ) for growing T. ma-rianensis cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-

PY - 2010

Y1 - 2010

N2 - Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. marianensis is an aerobic, thermophilic marine bacterium, originally isolated from the deepest part in the western Pacific Ocean (Mariana Trench) at the depth of 10, 897 m. Interestingly, the taxonomic status of the genus has not been clarified until now. The genus Thermaerobacter may represent a very deep group within the Firmicutes or potentially a novel phylum. The 2,844,696 bp long genome with its 2,375 protein-coding and 60 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. marianensis is an aerobic, thermophilic marine bacterium, originally isolated from the deepest part in the western Pacific Ocean (Mariana Trench) at the depth of 10, 897 m. Interestingly, the taxonomic status of the genus has not been clarified until now. The genus Thermaerobacter may represent a very deep group within the Firmicutes or potentially a novel phylum. The 2,844,696 bp long genome with its 2,375 protein-coding and 60 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Chemoheterotrophic

KW - Clostridiales

KW - Deep-sea

KW - Family incertae sedis XVII

KW - GEBA

KW - Gram-variable

KW - None-motile

KW - Strictly aerobic

KW - Thermophilic

UR - http://www.scopus.com/inward/record.url?scp=80053454597&partnerID=8YFLogxK

U2 - 10.4056/sigs.1373474

DO - 10.4056/sigs.1373474

M3 - Article

AN - SCOPUS:80053454597

VL - 3

SP - 337

EP - 345

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 3

ER -

ID: 87746227