Standard

Complete genome sequence of Meiothermus ruber type strain (21 T). / Tindall, Brian J.; Sikorski, Johannes; Lucas, Susan; Goltsman, Eugene; Copeland, Alex; del Rio, Tijana Glavina; Nolan, Matt; Tice, Hope; Cheng, Jan Fang; Han, Cliff; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Fähnrich, Regine; Goodwin, Lynne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Rohde, Manfred; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lapidus, Alla.

In: Standards in Genomic Sciences, Vol. 3, No. 1, 2010, p. 26-36.

Research output: Contribution to journal › Article › peer-review

Harvard

Tindall, BJ, Sikorski, J, Lucas, S, Goltsman, E, Copeland, A, del Rio, TG, Nolan, M, Tice, H, Cheng, JF, Han, C, Pitluck, S, Liolios, K, Mavromatis, K, Ovchinnikova, G, Pati, A, Fähnrich, R, Goodwin, L, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Rohde, M, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lapidus, A 2010, 'Complete genome sequence of Meiothermus ruber type strain (21 T)', Standards in Genomic Sciences, vol. 3, no. 1, pp. 26-36. https://doi.org/10.4056/sigs.1032748

APA

Tindall, B. J., Sikorski, J., Lucas, S., Goltsman, E., Copeland, A., del Rio, T. G., Nolan, M., Tice, H., Cheng, J. F., Han, C., Pitluck, S., Liolios, K., Mavromatis, K., Ovchinnikova, G., Pati, A., Fähnrich, R., Goodwin, L., Chen, A., Palaniappan, K., ... Lapidus, A. (2010). Complete genome sequence of Meiothermus ruber type strain (21 T). Standards in Genomic Sciences, 3(1), 26-36. https://doi.org/10.4056/sigs.1032748

Vancouver

Tindall BJ, Sikorski J, Lucas S, Goltsman E, Copeland A, del Rio TG et al. Complete genome sequence of Meiothermus ruber type strain (21 T). Standards in Genomic Sciences. 2010;3(1):26-36. https://doi.org/10.4056/sigs.1032748

Author

Tindall, Brian J. ; Sikorski, Johannes ; Lucas, Susan ; Goltsman, Eugene ; Copeland, Alex ; del Rio, Tijana Glavina ; Nolan, Matt ; Tice, Hope ; Cheng, Jan Fang ; Han, Cliff ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Fähnrich, Regine ; Goodwin, Lynne ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Rohde, Manfred ; Göker, Markus ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lapidus, Alla. / Complete genome sequence of Meiothermus ruber type strain (21 T). In: Standards in Genomic Sciences. 2010 ; Vol. 3, No. 1. pp. 26-36.

BibTeX

@article{ee195167a65349f18bd498effc4920fc,
title = "Complete genome sequence of Meiothermus ruber type strain (21 T)",
abstract = "Meiothermus ruber (Loginova et al. 1984) Nobre et al. 1996 is the type species of the genus Meiothermus. This thermophilic genus is of special interest, as its members share relatively low degrees of 16S rRNA gene sequence similarity and constitute a separate evolutionary li-neage from members of the genus Thermus, from which they can generally be distinguished by their slightly lower temperature optima. The temperature related split is in accordance with the chemotaxonomic feature of the polar lipids. M. ruber is a representative of the low-temperature group. This is the first completed genome sequence of the genus Meiothermus and only the third genome sequence to be published from a member of the family Therma-ceae. The 3,097,457 bp long genome with its 3,052 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Deino-cocci, Free-living, GEBA, Gram-negative, Non-motile, Thermales, Thermophilic",
author = "Tindall, {Brian J.} and Johannes Sikorski and Susan Lucas and Eugene Goltsman and Alex Copeland and {del Rio}, {Tijana Glavina} and Matt Nolan and Hope Tice and Cheng, {Jan Fang} and Cliff Han and Sam Pitluck and Konstantinos Liolios and Konstantinos Mavromatis and Galina Ovchinnikova and Amrita Pati and Regine F{\"a}hnrich and Lynne Goodwin and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Manfred Rohde and Markus G{\"o}ker and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Alla Lapidus",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-",
year = "2010",
doi = "10.4056/sigs.1032748",
language = "English",
volume = "3",
pages = "26--36",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Meiothermus ruber type strain (21 T)

AU - Tindall, Brian J.

AU - Sikorski, Johannes

AU - Lucas, Susan

AU - Goltsman, Eugene

AU - Copeland, Alex

AU - del Rio, Tijana Glavina

AU - Nolan, Matt

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Han, Cliff

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Mavromatis, Konstantinos

AU - Ovchinnikova, Galina

AU - Pati, Amrita

AU - Fähnrich, Regine

AU - Goodwin, Lynne

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Rohde, Manfred

AU - Göker, Markus

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Lapidus, Alla

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider (DSMZ) for DNA extraction and quality analysis. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-

PY - 2010

Y1 - 2010

N2 - Meiothermus ruber (Loginova et al. 1984) Nobre et al. 1996 is the type species of the genus Meiothermus. This thermophilic genus is of special interest, as its members share relatively low degrees of 16S rRNA gene sequence similarity and constitute a separate evolutionary li-neage from members of the genus Thermus, from which they can generally be distinguished by their slightly lower temperature optima. The temperature related split is in accordance with the chemotaxonomic feature of the polar lipids. M. ruber is a representative of the low-temperature group. This is the first completed genome sequence of the genus Meiothermus and only the third genome sequence to be published from a member of the family Therma-ceae. The 3,097,457 bp long genome with its 3,052 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Meiothermus ruber (Loginova et al. 1984) Nobre et al. 1996 is the type species of the genus Meiothermus. This thermophilic genus is of special interest, as its members share relatively low degrees of 16S rRNA gene sequence similarity and constitute a separate evolutionary li-neage from members of the genus Thermus, from which they can generally be distinguished by their slightly lower temperature optima. The temperature related split is in accordance with the chemotaxonomic feature of the polar lipids. M. ruber is a representative of the low-temperature group. This is the first completed genome sequence of the genus Meiothermus and only the third genome sequence to be published from a member of the family Therma-ceae. The 3,097,457 bp long genome with its 3,052 protein-coding and 53 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Deino-cocci

KW - Free-living

KW - GEBA

KW - Gram-negative

KW - Non-motile

KW - Thermales

KW - Thermophilic

UR - http://www.scopus.com/inward/record.url?scp=80053364713&partnerID=8YFLogxK

U2 - 10.4056/sigs.1032748

DO - 10.4056/sigs.1032748

M3 - Article

AN - SCOPUS:80053364713

VL - 3

SP - 26

EP - 36

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 88103323