Standard

Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T). / Pagani, Ioanna; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Desh-Pande, Shweta; Cheng, Jan Fang; Chertkov, Olga; Davenport, Karen; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Detter, John C.; Brambilla, Evelyne; Kannan, K. Palani; Djao, Olivier D.Ngatchou; Rohde, Manfred; Pukall, Rüdiger; Spring, Stefan; Göker, Markus; Sikorski, Johannes; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 4, No. 1, 2011, p. 100-110.

Research output: Contribution to journal › Article › peer-review

Harvard

Pagani, I, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Desh-Pande, S, Cheng, JF, Chertkov, O, Davenport, K, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Detter, JC, Brambilla, E, Kannan, KP, Djao, ODN, Rohde, M, Pukall, R, Spring, S, Göker, M, Sikorski, J, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2011, 'Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T)', Standards in Genomic Sciences, vol. 4, no. 1, pp. 100-110. https://doi.org/10.4056/sigs.1613929

APA

Pagani, I., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Desh-Pande, S., Cheng, J. F., Chertkov, O., Davenport, K., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Mavromatis, K., Pati, A., Chen, A., Palaniappan, K., Land, M., ... Klenk, H. P. (2011). Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T). Standards in Genomic Sciences, 4(1), 100-110. https://doi.org/10.4056/sigs.1613929

Vancouver

Pagani I, Lapidus A, Nolan M, Lucas S, Hammon N, Desh-Pande S et al. Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T). Standards in Genomic Sciences. 2011;4(1):100-110. https://doi.org/10.4056/sigs.1613929

Author

Pagani, Ioanna ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Desh-Pande, Shweta ; Cheng, Jan Fang ; Chertkov, Olga ; Davenport, Karen ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Detter, John C. ; Brambilla, Evelyne ; Kannan, K. Palani ; Djao, Olivier D.Ngatchou ; Rohde, Manfred ; Pukall, Rüdiger ; Spring, Stefan ; Göker, Markus ; Sikorski, Johannes ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T). In: Standards in Genomic Sciences. 2011 ; Vol. 4, No. 1. pp. 100-110.

BibTeX

@article{e99818848e30435795e8db413c762db2,
title = "Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T)",
abstract = "Desulfobulbus propionicus Widdel 1981 is the type species of the genus Desulfobulbus, which belongs to the family Desulfobulbaceae. The species is of interest because of its great implication in the sulfur cycle in aquatic sediments, its large substrate spectrum and a broad versatility in using various fermentation pathways. The species was the first example of a pure culture known to disproportionate elemental sulfur to sulfate and sulfide. This is the first completed genome sequence of a member of the genus Desulfobulbus and the third pub-lished genome sequence from a member of the family Desulfobulbaceae. The 3,851,869 bp long genome with its 3,351 protein-coding and 57 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.",
keywords = "Anaerobic, Chemoorganotroph, Desulfobulbaceae, Ellipsoidal to lemon-shaped, Geba, Gram-negative, Mesophilic, Non spore-forming, Non-motile",
author = "Ioanna Pagani and Alla Lapidus and Matt Nolan and Susan Lucas and Nancy Hammon and Shweta Desh-Pande and Cheng, {Jan Fang} and Olga Chertkov and Karen Davenport and Roxane Tapia and Cliff Han and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Detter, {John C.} and Evelyne Brambilla and Kannan, {K. Palani} and Djao, {Olivier D.Ngatchou} and Manfred Rohde and R{\"u}diger Pukall and Stefan Spring and Markus G{\"o}ker and Johannes Sikorski and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
note = "Funding Information: We would like to gratefully acknowledge the help of Katja Steenblock (DSMZ) for growing D. propionicus cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,",
year = "2011",
doi = "10.4056/sigs.1613929",
language = "English",
volume = "4",
pages = "100--110",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T)

AU - Pagani, Ioanna

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Lucas, Susan

AU - Hammon, Nancy

AU - Desh-Pande, Shweta

AU - Cheng, Jan Fang

AU - Chertkov, Olga

AU - Davenport, Karen

AU - Tapia, Roxane

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Detter, John C.

AU - Brambilla, Evelyne

AU - Kannan, K. Palani

AU - Djao, Olivier D.Ngatchou

AU - Rohde, Manfred

AU - Pukall, Rüdiger

AU - Spring, Stefan

AU - Göker, Markus

AU - Sikorski, Johannes

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

N1 - Funding Information: We would like to gratefully acknowledge the help of Katja Steenblock (DSMZ) for growing D. propionicus cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,

PY - 2011

Y1 - 2011

N2 - Desulfobulbus propionicus Widdel 1981 is the type species of the genus Desulfobulbus, which belongs to the family Desulfobulbaceae. The species is of interest because of its great implication in the sulfur cycle in aquatic sediments, its large substrate spectrum and a broad versatility in using various fermentation pathways. The species was the first example of a pure culture known to disproportionate elemental sulfur to sulfate and sulfide. This is the first completed genome sequence of a member of the genus Desulfobulbus and the third pub-lished genome sequence from a member of the family Desulfobulbaceae. The 3,851,869 bp long genome with its 3,351 protein-coding and 57 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.

AB - Desulfobulbus propionicus Widdel 1981 is the type species of the genus Desulfobulbus, which belongs to the family Desulfobulbaceae. The species is of interest because of its great implication in the sulfur cycle in aquatic sediments, its large substrate spectrum and a broad versatility in using various fermentation pathways. The species was the first example of a pure culture known to disproportionate elemental sulfur to sulfate and sulfide. This is the first completed genome sequence of a member of the genus Desulfobulbus and the third pub-lished genome sequence from a member of the family Desulfobulbaceae. The 3,851,869 bp long genome with its 3,351 protein-coding and 57 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.

KW - Anaerobic

KW - Chemoorganotroph

KW - Desulfobulbaceae

KW - Ellipsoidal to lemon-shaped

KW - Geba

KW - Gram-negative

KW - Mesophilic

KW - Non spore-forming

KW - Non-motile

UR - http://www.scopus.com/inward/record.url?scp=80053359627&partnerID=8YFLogxK

U2 - 10.4056/sigs.1613929

DO - 10.4056/sigs.1613929

M3 - Article

AN - SCOPUS:80053359627

VL - 4

SP - 100

EP - 110

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 1

ER -

ID: 85684975