Standard

Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T). / Pukall, Rüdiger; Zeytun, Ahmet; Lucas, Susan; Lapidus, Alla; Hammon, Nancy; Deshpande, Shweta; Nolan, Matt; Cheng, Jan Fang; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Mavromatis, Konstantinos; Pati, Amrita; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brambilla, Evelyne Marie; Rohde, Manfred; Göker, Markus; Detter, J. Chris; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 4, No. 2, 11.10.2011, p. 163-172.

Research output: Contribution to journal › Article › peer-review

Harvard

Pukall, R, Zeytun, A, Lucas, S, Lapidus, A, Hammon, N, Deshpande, S, Nolan, M, Cheng, JF, Pitluck, S, Liolios, K, Pagani, I, Mavromatis, K, Pati, A, Tapia, R, Han, C, Goodwin, L, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Brambilla, EM, Rohde, M, Göker, M, Detter, JC, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2011, 'Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T)', Standards in Genomic Sciences, vol. 4, no. 2, pp. 163-172. https://doi.org/10.4056/sigs.1633949

APA

Pukall, R., Zeytun, A., Lucas, S., Lapidus, A., Hammon, N., Deshpande, S., Nolan, M., Cheng, J. F., Pitluck, S., Liolios, K., Pagani, I., Mavromatis, K., Pati, A., Tapia, R., Han, C., Goodwin, L., Chen, A., Palaniappan, K., Land, M., ... Klenk, H. P. (2011). Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T). Standards in Genomic Sciences, 4(2), 163-172. https://doi.org/10.4056/sigs.1633949

Vancouver

Pukall R, Zeytun A, Lucas S, Lapidus A, Hammon N, Deshpande S et al. Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T). Standards in Genomic Sciences. 2011 Oct 11;4(2):163-172. https://doi.org/10.4056/sigs.1633949

Author

Pukall, Rüdiger ; Zeytun, Ahmet ; Lucas, Susan ; Lapidus, Alla ; Hammon, Nancy ; Deshpande, Shweta ; Nolan, Matt ; Cheng, Jan Fang ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Mavromatis, Konstantinos ; Pati, Amrita ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Brambilla, Evelyne Marie ; Rohde, Manfred ; Göker, Markus ; Detter, J. Chris ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T). In: Standards in Genomic Sciences. 2011 ; Vol. 4, No. 2. pp. 163-172.

BibTeX

@article{326dbfecb0604eaeb7858e1cf816c184,
title = "Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T)",
abstract = "Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococ-cus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus-Thermus. Strain LB-34T was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geo-thermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these spe-cies adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. ma-ricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromo-some and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Chemoorga-notrophic, Deinococcaceae, GEBA, Gram-positive, Mesophilic, Non-motile, Radiation-resistant",
author = "R{\"u}diger Pukall and Ahmet Zeytun and Susan Lucas and Alla Lapidus and Nancy Hammon and Shweta Deshpande and Matt Nolan and Cheng, {Jan Fang} and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Konstantinos Mavromatis and Amrita Pati and Roxane Tapia and Cliff Han and Lynne Goodwin and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Brambilla, {Evelyne Marie} and Manfred Rohde and Markus G{\"o}ker and Detter, {J. Chris} and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
year = "2011",
month = oct,
day = "11",
doi = "10.4056/sigs.1633949",
language = "English",
volume = "4",
pages = "163--172",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "2",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T)

AU - Pukall, Rüdiger

AU - Zeytun, Ahmet

AU - Lucas, Susan

AU - Lapidus, Alla

AU - Hammon, Nancy

AU - Deshpande, Shweta

AU - Nolan, Matt

AU - Cheng, Jan Fang

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Pagani, Ioanna

AU - Mavromatis, Konstantinos

AU - Pati, Amrita

AU - Tapia, Roxane

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Brambilla, Evelyne Marie

AU - Rohde, Manfred

AU - Göker, Markus

AU - Detter, J. Chris

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

PY - 2011/10/11

Y1 - 2011/10/11

N2 - Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococ-cus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus-Thermus. Strain LB-34T was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geo-thermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these spe-cies adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. ma-ricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromo-some and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococ-cus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus-Thermus. Strain LB-34T was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geo-thermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these spe-cies adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. ma-ricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromo-some and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Chemoorga-notrophic

KW - Deinococcaceae

KW - GEBA

KW - Gram-positive

KW - Mesophilic

KW - Non-motile

KW - Radiation-resistant

UR - http://www.scopus.com/inward/record.url?scp=80053348542&partnerID=8YFLogxK

U2 - 10.4056/sigs.1633949

DO - 10.4056/sigs.1633949

M3 - Article

AN - SCOPUS:80053348542

VL - 4

SP - 163

EP - 172

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 2

ER -

ID: 36864437