Standard

Complete genome sequence of Conexibacter woesei type strain (ID131577 T). / Pukall, Rüdiger; Lapidus, Alla; Glavina Del Rio, Tijana; Copeland, Alex; Tice, Hope; Cheng, Jan Fang; Lucas, Susan; Chen, Feng; Nolan, Matt; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Ivanova, Natalia; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Meincke, Linda; Sims, David; Brettin, Thomas; Detter, John C.; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A.; Markowitz, Victor; Kyrpides, Nikos C.; Klenk, Hans Peter; Hugenholtz, Philip.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 212-219.

Research output: Contribution to journal › Article › peer-review

Harvard

Pukall, R, Lapidus, A, Glavina Del Rio, T, Copeland, A, Tice, H, Cheng, JF, Lucas, S, Chen, F, Nolan, M, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Ivanova, N, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Meincke, L, Sims, D, Brettin, T, Detter, JC, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Kyrpides, NC, Klenk, HP & Hugenholtz, P 2010, 'Complete genome sequence of Conexibacter woesei type strain (ID131577 T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 212-219. https://doi.org/10.4056/sigs.751339

APA

Pukall, R., Lapidus, A., Glavina Del Rio, T., Copeland, A., Tice, H., Cheng, J. F., Lucas, S., Chen, F., Nolan, M., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Ivanova, N., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., Land, M., ... Hugenholtz, P. (2010). Complete genome sequence of Conexibacter woesei type strain (ID131577 T). Standards in Genomic Sciences, 2(2), 212-219. https://doi.org/10.4056/sigs.751339

Vancouver

Pukall R, Lapidus A, Glavina Del Rio T, Copeland A, Tice H, Cheng JF et al. Complete genome sequence of Conexibacter woesei type strain (ID131577 T). Standards in Genomic Sciences. 2010;2(2):212-219. https://doi.org/10.4056/sigs.751339

Author

Pukall, Rüdiger ; Lapidus, Alla ; Glavina Del Rio, Tijana ; Copeland, Alex ; Tice, Hope ; Cheng, Jan Fang ; Lucas, Susan ; Chen, Feng ; Nolan, Matt ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Ivanova, Natalia ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Meincke, Linda ; Sims, David ; Brettin, Thomas ; Detter, John C. ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A. ; Markowitz, Victor ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Hugenholtz, Philip. / Complete genome sequence of Conexibacter woesei type strain (ID131577 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 212-219.

BibTeX

@article{321cfe03d45e4f039b32ccba5b948ebc,
title = "Complete genome sequence of Conexibacter woesei type strain (ID131577 T)",
abstract = "The genus Conexibacter (Monciardini et al. 2003) represents the type genus of the family Conexibacteraceae (Stackebrandt 2005, emend. Zhi et al. 2009) with Conexibacter woesei as the type species of the genus. C. woesei is a representative of a deep evolutionary line of des-cent within the class Actinobacteria. Strain ID131577 T was originally isolated from temperate forest soil in Gerenzano (Italy). Cells are small, short rods that are motile by peritrichous fla-gella. They may form aggregates after a longer period of growth and, then as a typical charac-teristic, an undulate structure is formed by self-aggregation of flagella with entangled bacteri-al cells. Here we describe the features of the organism, together with the complete sequence and annotation. The 6,359,369 bp long genome of C. woesei contains 5,950 protein-coding and 48 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Aerobic, Conexibacteraceae, Forest soil, GEBA, Short rods, Solirubrobacterales",
author = "R{\"u}diger Pukall and Alla Lapidus and {Glavina Del Rio}, Tijana and Alex Copeland and Hope Tice and Cheng, {Jan Fang} and Susan Lucas and Feng Chen and Matt Nolan and David Bruce and Lynne Goodwin and Sam Pitluck and Konstantinos Mavromatis and Natalia Ivanova and Galina Ovchinnikova and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Patrick Chain and Linda Meincke and David Sims and Thomas Brettin and Detter, {John C.} and Manfred Rohde and Markus G{\"o}ker and Jim Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Philip Hugenholtz",
note = "Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider for DNA extraction and quality analysis and Katja Steenblock for growing C. woesei cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of Califor-",
year = "2010",
doi = "10.4056/sigs.751339",
language = "English",
volume = "2",
pages = "212--219",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "2",

}

RIS

TY - JOUR

T1 - Complete genome sequence of Conexibacter woesei type strain (ID131577 T)

AU - Pukall, Rüdiger

AU - Lapidus, Alla

AU - Glavina Del Rio, Tijana

AU - Copeland, Alex

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Lucas, Susan

AU - Chen, Feng

AU - Nolan, Matt

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Mavromatis, Konstantinos

AU - Ivanova, Natalia

AU - Ovchinnikova, Galina

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Chain, Patrick

AU - Meincke, Linda

AU - Sims, David

AU - Brettin, Thomas

AU - Detter, John C.

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A.

AU - Markowitz, Victor

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

AU - Hugenholtz, Philip

N1 - Funding Information: We would like to gratefully acknowledge the help of Susanne Schneider for DNA extraction and quality analysis and Katja Steenblock for growing C. woesei cultures and Susanne Schneider for DNA extraction and quality analysis (both at DSMZ). This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program, and by the University of Califor-

PY - 2010

Y1 - 2010

N2 - The genus Conexibacter (Monciardini et al. 2003) represents the type genus of the family Conexibacteraceae (Stackebrandt 2005, emend. Zhi et al. 2009) with Conexibacter woesei as the type species of the genus. C. woesei is a representative of a deep evolutionary line of des-cent within the class Actinobacteria. Strain ID131577 T was originally isolated from temperate forest soil in Gerenzano (Italy). Cells are small, short rods that are motile by peritrichous fla-gella. They may form aggregates after a longer period of growth and, then as a typical charac-teristic, an undulate structure is formed by self-aggregation of flagella with entangled bacteri-al cells. Here we describe the features of the organism, together with the complete sequence and annotation. The 6,359,369 bp long genome of C. woesei contains 5,950 protein-coding and 48 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - The genus Conexibacter (Monciardini et al. 2003) represents the type genus of the family Conexibacteraceae (Stackebrandt 2005, emend. Zhi et al. 2009) with Conexibacter woesei as the type species of the genus. C. woesei is a representative of a deep evolutionary line of des-cent within the class Actinobacteria. Strain ID131577 T was originally isolated from temperate forest soil in Gerenzano (Italy). Cells are small, short rods that are motile by peritrichous fla-gella. They may form aggregates after a longer period of growth and, then as a typical charac-teristic, an undulate structure is formed by self-aggregation of flagella with entangled bacteri-al cells. Here we describe the features of the organism, together with the complete sequence and annotation. The 6,359,369 bp long genome of C. woesei contains 5,950 protein-coding and 48 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Conexibacteraceae

KW - Forest soil

KW - GEBA

KW - Short rods

KW - Solirubrobacterales

UR - http://www.scopus.com/inward/record.url?scp=80053444211&partnerID=8YFLogxK

U2 - 10.4056/sigs.751339

DO - 10.4056/sigs.751339

M3 - Article

AN - SCOPUS:80053444211

VL - 2

SP - 212

EP - 219

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

SN - 1944-3277

IS - 2

ER -

ID: 88102148