Standard
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T). / Pitluck, Sam; Sikorski, Johannes; Zeytun, Ahmet; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Liolios, Konstantinos; Pagani, Ioanna; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Detter, John C.; Brambilla, Evelyne; Djao, Oliver D.Ngatchou; Rohde, Manfred; Spring, Stefan; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Land, Miriam.
In:
Standards in Genomic Sciences, Vol. 4, No. 1, 2011, p. 54-62.
Research output: Contribution to journal › Article › peer-review
Harvard
Pitluck, S, Sikorski, J, Zeytun, A
, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Liolios, K, Pagani, I, Mavromatis, K, Pati, A, Chen, A, Palaniappan, K, Hauser, L, Chang, YJ, Jeffries, CD, Detter, JC, Brambilla, E, Djao, ODN, Rohde, M, Spring, S, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Land, M 2011, '
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T)',
Standards in Genomic Sciences, vol. 4, no. 1, pp. 54-62.
https://doi.org/10.4056/sigs.1523807APA
Pitluck, S., Sikorski, J., Zeytun, A.
, Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Liolios, K., Pagani, I., Mavromatis, K., Pati, A., Chen, A., Palaniappan, K., Hauser, L., ... Land, M. (2011).
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T).
Standards in Genomic Sciences,
4(1), 54-62.
https://doi.org/10.4056/sigs.1523807Vancouver
Author
Pitluck, Sam ; Sikorski, Johannes ; Zeytun, Ahmet
; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Liolios, Konstantinos ; Pagani, Ioanna ; Mavromatis, Konstantinos ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Detter, John C. ; Brambilla, Evelyne ; Djao, Oliver D.Ngatchou ; Rohde, Manfred ; Spring, Stefan ; Göker, Markus ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Land, Miriam. /
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T). In:
Standards in Genomic Sciences. 2011 ; Vol. 4, No. 1. pp. 54-62.
BibTeX
@article{5b544554249e4adab2fafd24c3244760,
title = "Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T)",
abstract = "Calditerrivibrio nitroreducens Iino et al. 2008 is the type species of the genus Calditerrivibrio. The species is of interest because of its important role in the nitrate cycle as nitrate reducer and for its isolated phylogenetic position in the Tree of Life. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the third complete genome sequence of a member of the family Deferribacteraceae. The 2,216,552 bp long genome with its 2,128 protein-coding and 50 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.",
keywords = "Chemoorga-noheterotroph, Deferribacteraceae, GEBA, Gram-negative, Hot spring, Moderately thermophilic, Motile, Strictly anaerobic",
author = "Sam Pitluck and Johannes Sikorski and Ahmet Zeytun and Alla Lapidus and Matt Nolan and Susan Lucas and Nancy Hammon and Shweta Deshpande and Cheng, {Jan Fang} and Roxane Tapia and Cliff Han and Lynne Goodwin and Konstantinos Liolios and Ioanna Pagani and Konstantinos Mavromatis and Amrita Pati and Amy Chen and Krishna Palaniappan and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Detter, {John C.} and Evelyne Brambilla and Djao, {Oliver D.Ngatchou} and Manfred Rohde and Stefan Spring and Markus G{\"o}ker and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Miriam Land",
note = "Funding Information: We would like to gratefully acknowledge the help of Maren Schr{\"o}der (DSMZ) for the growth of C. nitroredu-cens cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-",
year = "2011",
doi = "10.4056/sigs.1523807",
language = "English",
volume = "4",
pages = "54--62",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",
}
RIS
TY - JOUR
T1 - Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T)
AU - Pitluck, Sam
AU - Sikorski, Johannes
AU - Zeytun, Ahmet
AU - Lapidus, Alla
AU - Nolan, Matt
AU - Lucas, Susan
AU - Hammon, Nancy
AU - Deshpande, Shweta
AU - Cheng, Jan Fang
AU - Tapia, Roxane
AU - Han, Cliff
AU - Goodwin, Lynne
AU - Liolios, Konstantinos
AU - Pagani, Ioanna
AU - Mavromatis, Konstantinos
AU - Pati, Amrita
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Detter, John C.
AU - Brambilla, Evelyne
AU - Djao, Oliver D.Ngatchou
AU - Rohde, Manfred
AU - Spring, Stefan
AU - Göker, Markus
AU - Woyke, Tanja
AU - Bristow, James
AU - Eisen, Jonathan A.
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
AU - Land, Miriam
N1 - Funding Information:
We would like to gratefully acknowledge the help of Maren Schröder (DSMZ) for the growth of C. nitroredu-cens cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-
PY - 2011
Y1 - 2011
N2 - Calditerrivibrio nitroreducens Iino et al. 2008 is the type species of the genus Calditerrivibrio. The species is of interest because of its important role in the nitrate cycle as nitrate reducer and for its isolated phylogenetic position in the Tree of Life. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the third complete genome sequence of a member of the family Deferribacteraceae. The 2,216,552 bp long genome with its 2,128 protein-coding and 50 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.
AB - Calditerrivibrio nitroreducens Iino et al. 2008 is the type species of the genus Calditerrivibrio. The species is of interest because of its important role in the nitrate cycle as nitrate reducer and for its isolated phylogenetic position in the Tree of Life. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the third complete genome sequence of a member of the family Deferribacteraceae. The 2,216,552 bp long genome with its 2,128 protein-coding and 50 RNA genes is a part of the Genomic En-cyclopedia of Bacteria and Archaea project.
KW - Chemoorga-noheterotroph
KW - Deferribacteraceae
KW - GEBA
KW - Gram-negative
KW - Hot spring
KW - Moderately thermophilic
KW - Motile
KW - Strictly anaerobic
UR - http://www.scopus.com/inward/record.url?scp=80053360941&partnerID=8YFLogxK
U2 - 10.4056/sigs.1523807
DO - 10.4056/sigs.1523807
M3 - Article
AN - SCOPUS:80053360941
VL - 4
SP - 54
EP - 62
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 1
ER -
