Standard
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T). / Pati, Amrita; Gronow, Sabine; Zeytun, Ahmet; Lapidus, Alla; Nolan, Matt; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Detter, John C.; Brambilla, Evelyne; Rohde, Manfred; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lucas, Susan L.
In:
Standards in Genomic Sciences, Vol. 4, No. 1, 2011, p. 45-53.
Research output: Contribution to journal › Article › peer-review
Harvard
Pati, A, Gronow, S, Zeytun, A
, Lapidus, A, Nolan, M, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Mavromatis, K, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Detter, JC, Brambilla, E, Rohde, M, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lucas, SL 2011, '
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T)',
Standards in Genomic Sciences, vol. 4, no. 1, pp. 45-53.
https://doi.org/10.4056/sigs.1513795APA
Pati, A., Gronow, S., Zeytun, A.
, Lapidus, A., Nolan, M., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Mavromatis, K., Chen, A., Palaniappan, K., Land, M., Hauser, L., ... Lucas, S. L. (2011).
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T).
Standards in Genomic Sciences,
4(1), 45-53.
https://doi.org/10.4056/sigs.1513795Vancouver
Author
Pati, Amrita ; Gronow, Sabine ; Zeytun, Ahmet
; Lapidus, Alla ; Nolan, Matt ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Detter, John C. ; Brambilla, Evelyne ; Rohde, Manfred ; Göker, Markus ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lucas, Susan L. /
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T). In:
Standards in Genomic Sciences. 2011 ; Vol. 4, No. 1. pp. 45-53.
BibTeX
@article{92e027dd8bd54c45926350ae505de78c,
title = "Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T)",
abstract = "Bacteroides helcogenes Benno et al. 1983 is of interest because of its isolated phylogenetic location and, although it has been found in pig feces and is known to be pathogenic for pigs, occurrence of this bacterium is rare and it does not cause significant damage in intensive an-imal husbandry. The genome of B. helcogenes P 36-108 T is already the fifth completed and published type strain genome from the genus Bacteroides in the family Bacteroidaceae. The 3,998,906 bp long genome with its 3,353 protein-coding and 83 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Animal pathogen, Bacteroidaceae, Chemoorganotrophic, GEBA, Gram-negative, Mesophilic, Nonmotile, Pig abscess, Strictly anaerobic",
author = "Amrita Pati and Sabine Gronow and Ahmet Zeytun and Alla Lapidus and Matt Nolan and Nancy Hammon and Shweta Deshpande and Cheng, {Jan Fang} and Roxane Tapia and Cliff Han and Lynne Goodwin and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Konstantinos Mavromatis and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Detter, {John C.} and Evelyne Brambilla and Manfred Rohde and Markus G{\"o}ker and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter} and Lucas, {Susan L.}",
note = "Funding Information: We would like to gratefully acknowledge the help of Sabine Welnitz (DSMZ) for growing B. helcogenes cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,",
year = "2011",
doi = "10.4056/sigs.1513795",
language = "English",
volume = "4",
pages = "45--53",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",
}
RIS
TY - JOUR
T1 - Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T)
AU - Pati, Amrita
AU - Gronow, Sabine
AU - Zeytun, Ahmet
AU - Lapidus, Alla
AU - Nolan, Matt
AU - Hammon, Nancy
AU - Deshpande, Shweta
AU - Cheng, Jan Fang
AU - Tapia, Roxane
AU - Han, Cliff
AU - Goodwin, Lynne
AU - Pitluck, Sam
AU - Liolios, Konstantinos
AU - Pagani, Ioanna
AU - Mavromatis, Konstantinos
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Land, Miriam
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Detter, John C.
AU - Brambilla, Evelyne
AU - Rohde, Manfred
AU - Göker, Markus
AU - Woyke, Tanja
AU - Bristow, James
AU - Eisen, Jonathan A.
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
AU - Lucas, Susan L.
N1 - Funding Information:
We would like to gratefully acknowledge the help of Sabine Welnitz (DSMZ) for growing B. helcogenes cultures. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,
PY - 2011
Y1 - 2011
N2 - Bacteroides helcogenes Benno et al. 1983 is of interest because of its isolated phylogenetic location and, although it has been found in pig feces and is known to be pathogenic for pigs, occurrence of this bacterium is rare and it does not cause significant damage in intensive an-imal husbandry. The genome of B. helcogenes P 36-108 T is already the fifth completed and published type strain genome from the genus Bacteroides in the family Bacteroidaceae. The 3,998,906 bp long genome with its 3,353 protein-coding and 83 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Bacteroides helcogenes Benno et al. 1983 is of interest because of its isolated phylogenetic location and, although it has been found in pig feces and is known to be pathogenic for pigs, occurrence of this bacterium is rare and it does not cause significant damage in intensive an-imal husbandry. The genome of B. helcogenes P 36-108 T is already the fifth completed and published type strain genome from the genus Bacteroides in the family Bacteroidaceae. The 3,998,906 bp long genome with its 3,353 protein-coding and 83 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - Animal pathogen
KW - Bacteroidaceae
KW - Chemoorganotrophic
KW - GEBA
KW - Gram-negative
KW - Mesophilic
KW - Nonmotile
KW - Pig abscess
KW - Strictly anaerobic
UR - http://www.scopus.com/inward/record.url?scp=80053354421&partnerID=8YFLogxK
U2 - 10.4056/sigs.1513795
DO - 10.4056/sigs.1513795
M3 - Article
AN - SCOPUS:80053354421
VL - 4
SP - 45
EP - 53
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 1
ER -
