DOI

  • Yun Juan Chang
  • Rüdiger Pukall
  • Elizabeth Saunders
  • Alex Copeland
  • Matt Nolan
  • Tijana Glavina del Rio
  • Susan Lucas
  • Feng Chen
  • Hope Tice
  • Jan Fang Cheng
  • Cliff Han
  • John C. Detter
  • David Bruce
  • Lynne Goodwin
  • Sam Pitluck
  • Konstantinos Liolios
  • Amrita Pati
  • Konstantinos Mavromatis
  • Amy Chen
  • Krishna Palaniappan
  • Miriam Land
  • Loren Hauser
  • Cynthia D. Jeffries
  • Thomas Brettin
  • Manfred Rohde
  • Markus Göker
  • James Bristow
  • Jonathan A. Eisen
  • Victor Markowitz
  • Philip Hugenholtz
  • Nikos C. Kyrpides
  • Hans Peter Klenk

Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococ-cus, and is of phylogenetic interest because of its isolated placement in a genomically little characterized region of the Firmicutes. A. fermentans is known for its habitation of the ga-strointestinal tract and its ability to oxidize trans-aconitate. Its anaerobic fermentation of glu-tamate has been intensively studied and will now be complemented by the genomic basis. The strain described in this report is a nonsporulating, nonmotile, Gram-negative coccus, originally isolated from a pig alimentary tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete ge-nome sequence of a member of the family Acidaminococcaceae, and the 2,329,769 bp long genome with its 2,101 protein-coding and 81 RNA genes is part of the Genomic Encyclope-dia of Bacteria and Archaea project.

Original languageEnglish
Pages (from-to)1-14
Number of pages14
JournalStandards in Genomic Sciences
Volume3
Issue number1
DOIs
StatePublished - 2010

    Research areas

  • Acidaminococcaceae, Anaerobic, Diplococcus, Gastrointestinal tract, GEBA, Glutamate fermentation, Mesophile, Negativicutes, Selenomonadales, Trans-aconitate degrada-tion

    Scopus subject areas

  • Genetics

ID: 90013576