Standard
Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T). / Sikorski, Johannes; Lapidus, Alla; Chertkov, Olga; Lucas, Susan; Copeland, Alex; del Rio, Tijana Glavina; Nolan, Matt; Tice, Hope; Cheng, Jan Fang; Han, Cliff; Brambilla, Evelyne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pati, Amrita; Bruce, David; Detter, Chris; Tapia, Roxanne; Goodwin, Lynne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Rohde, Manfred; Göker, Markus; Spring, Stefan; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.
In:
Standards in Genomic Sciences, Vol. 3, No. 1, 2010, p. 57-65.
Research output: Contribution to journal › Article › peer-review
Harvard
Sikorski, J
, Lapidus, A, Chertkov, O, Lucas, S, Copeland, A, del Rio, TG, Nolan, M, Tice, H, Cheng, JF, Han, C, Brambilla, E, Pitluck, S, Liolios, K, Mavromatis, K, Pati, A, Bruce, D, Detter, C, Tapia, R, Goodwin, L, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Rohde, M, Göker, M, Spring, S, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, '
Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T)',
Standards in Genomic Sciences, vol. 3, no. 1, pp. 57-65.
https://doi.org/10.4056/sigs.1062906APA
Sikorski, J.
, Lapidus, A., Chertkov, O., Lucas, S., Copeland, A., del Rio, T. G., Nolan, M., Tice, H., Cheng, J. F., Han, C., Brambilla, E., Pitluck, S., Liolios, K., Mavromatis, K., Pati, A., Bruce, D., Detter, C., Tapia, R., Goodwin, L., ... Klenk, H. P. (2010).
Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T).
Standards in Genomic Sciences,
3(1), 57-65.
https://doi.org/10.4056/sigs.1062906Vancouver
Author
Sikorski, Johannes
; Lapidus, Alla ; Chertkov, Olga ; Lucas, Susan ; Copeland, Alex ; del Rio, Tijana Glavina ; Nolan, Matt ; Tice, Hope ; Cheng, Jan Fang ; Han, Cliff ; Brambilla, Evelyne ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Pati, Amrita ; Bruce, David ; Detter, Chris ; Tapia, Roxanne ; Goodwin, Lynne ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Rohde, Manfred ; Göker, Markus ; Spring, Stefan ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A. ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. /
Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T). In:
Standards in Genomic Sciences. 2010 ; Vol. 3, No. 1. pp. 57-65.
BibTeX
@article{42279541e6c34a8e989a00f17dd17cd0,
title = "Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T)",
abstract = "Acetohalobium arabaticum Zhilina and Zavarzin 1990 is of special interest because of its physiology and its participation in the anaerobic C 1-trophic chain in hypersaline environ-ments. This is the first completed genome sequence of the family Halobacteroidaceae and only the second genome sequence in the order Halanaerobiales. The 2,469,596 bp long ge-nome with its 2,353 protein-coding and 90 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "Anaerobe, Chemolithotroph, Clostridia, Consumption of trimethylamine, Degradation of betaine, GEBA, Halanae-robiales, Halophile, Homoacetogen, Mesophile, Methylotroph, Organotroph",
author = "Johannes Sikorski and Alla Lapidus and Olga Chertkov and Susan Lucas and Alex Copeland and {del Rio}, {Tijana Glavina} and Matt Nolan and Hope Tice and Cheng, {Jan Fang} and Cliff Han and Evelyne Brambilla and Sam Pitluck and Konstantinos Liolios and Konstantinos Mavromatis and Amrita Pati and David Bruce and Chris Detter and Roxanne Tapia and Lynne Goodwin and Amy Chen and Krishna Palaniappan and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Manfred Rohde and Markus G{\"o}ker and Stefan Spring and Tanja Woyke and James Bristow and Eisen, {Jonathan A.} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
note = "Funding Information: We would like to gratefully acknowledge the help of Maren Schr{\"o}der (DSMZ) for growing cultures of A. ara-baticum. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,",
year = "2010",
doi = "10.4056/sigs.1062906",
language = "English",
volume = "3",
pages = "57--65",
journal = "Standards in Genomic Sciences",
issn = "1944-3277",
publisher = "Michigan State University",
number = "1",
}
RIS
TY - JOUR
T1 - Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T)
AU - Sikorski, Johannes
AU - Lapidus, Alla
AU - Chertkov, Olga
AU - Lucas, Susan
AU - Copeland, Alex
AU - del Rio, Tijana Glavina
AU - Nolan, Matt
AU - Tice, Hope
AU - Cheng, Jan Fang
AU - Han, Cliff
AU - Brambilla, Evelyne
AU - Pitluck, Sam
AU - Liolios, Konstantinos
AU - Mavromatis, Konstantinos
AU - Pati, Amrita
AU - Bruce, David
AU - Detter, Chris
AU - Tapia, Roxanne
AU - Goodwin, Lynne
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Land, Miriam
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Rohde, Manfred
AU - Göker, Markus
AU - Spring, Stefan
AU - Woyke, Tanja
AU - Bristow, James
AU - Eisen, Jonathan A.
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
N1 - Funding Information:
We would like to gratefully acknowledge the help of Maren Schröder (DSMZ) for growing cultures of A. ara-baticum. This work was performed under the auspices of the US Department of Energy Office of Science, Biological and Environmental Research Program, and by the University of California, Lawrence Berkeley National Laboratory under contract No. DE-AC02-05CH11231,
PY - 2010
Y1 - 2010
N2 - Acetohalobium arabaticum Zhilina and Zavarzin 1990 is of special interest because of its physiology and its participation in the anaerobic C 1-trophic chain in hypersaline environ-ments. This is the first completed genome sequence of the family Halobacteroidaceae and only the second genome sequence in the order Halanaerobiales. The 2,469,596 bp long ge-nome with its 2,353 protein-coding and 90 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Acetohalobium arabaticum Zhilina and Zavarzin 1990 is of special interest because of its physiology and its participation in the anaerobic C 1-trophic chain in hypersaline environ-ments. This is the first completed genome sequence of the family Halobacteroidaceae and only the second genome sequence in the order Halanaerobiales. The 2,469,596 bp long ge-nome with its 2,353 protein-coding and 90 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - Anaerobe
KW - Chemolithotroph
KW - Clostridia
KW - Consumption of trimethylamine
KW - Degradation of betaine
KW - GEBA
KW - Halanae-robiales
KW - Halophile
KW - Homoacetogen
KW - Mesophile
KW - Methylotroph
KW - Organotroph
UR - http://www.scopus.com/inward/record.url?scp=80053358802&partnerID=8YFLogxK
U2 - 10.4056/sigs.1062906
DO - 10.4056/sigs.1062906
M3 - Article
AN - SCOPUS:80053358802
VL - 3
SP - 57
EP - 65
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 1
ER -
