Standard

Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. / Kim, S.; Cho, Y.S.; Kim, H.-M.; Chung, O.; Kim, H.; Jho, S.; Seomun, H.; Kim, J.; Bang, W.Y.; Kim, C.; An, J.; Bae, C.H.; Bhak, Y.; Jeon, S.; Yoon, H.; Kim, Y.; Jun, J.H.; Lee, H.J.; Cho, S.; Uphyrkina, O.; Kostyria, A.; Goodrich, J.; Miquelle, D.; Roelke, M.; Lewis, J.; Yurchenko, A.; Bankevich, A.; Cho, J.; Lee, S.; Edwards, J.S.; Weber, J.A.; Cook, J.; Lee, H.; Manica, A.; Lee, I.; O'Brien, S.J.; Bhak, J.; Yeo, J.-H.

In: Genome Biology, Vol. 17, No. 1, 2016.

Research output: Contribution to journal › Article

Harvard

Kim, S, Cho, YS, Kim, H-M, Chung, O, Kim, H, Jho, S, Seomun, H, Kim, J, Bang, WY, Kim, C, An, J, Bae, CH, Bhak, Y, Jeon, S, Yoon, H, Kim, Y, Jun, JH, Lee, HJ, Cho, S, Uphyrkina, O, Kostyria, A, Goodrich, J, Miquelle, D, Roelke, M, Lewis, J, Yurchenko, A, Bankevich, A, Cho, J, Lee, S, Edwards, JS, Weber, JA, Cook, J, Lee, H, Manica, A, Lee, I, O'Brien, SJ, Bhak, J & Yeo, J-H 2016, 'Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly', Genome Biology, vol. 17, no. 1. https://doi.org/10.1186/s13059-016-1071-4

APA

Kim, S., Cho, Y. S., Kim, H-M., Chung, O., Kim, H., Jho, S., Seomun, H., Kim, J., Bang, W. Y., Kim, C., An, J., Bae, C. H., Bhak, Y., Jeon, S., Yoon, H., Kim, Y., Jun, J. H., Lee, H. J., Cho, S., ... Yeo, J-H. (2016). Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. Genome Biology, 17(1). https://doi.org/10.1186/s13059-016-1071-4

Vancouver

Kim S, Cho YS, Kim H-M, Chung O, Kim H, Jho S et al. Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. Genome Biology. 2016;17(1). https://doi.org/10.1186/s13059-016-1071-4

Author

Kim, S. ; Cho, Y.S. ; Kim, H.-M. ; Chung, O. ; Kim, H. ; Jho, S. ; Seomun, H. ; Kim, J. ; Bang, W.Y. ; Kim, C. ; An, J. ; Bae, C.H. ; Bhak, Y. ; Jeon, S. ; Yoon, H. ; Kim, Y. ; Jun, J.H. ; Lee, H.J. ; Cho, S. ; Uphyrkina, O. ; Kostyria, A. ; Goodrich, J. ; Miquelle, D. ; Roelke, M. ; Lewis, J. ; Yurchenko, A. ; Bankevich, A. ; Cho, J. ; Lee, S. ; Edwards, J.S. ; Weber, J.A. ; Cook, J. ; Lee, H. ; Manica, A. ; Lee, I. ; O'Brien, S.J. ; Bhak, J. ; Yeo, J.-H. / Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. In: Genome Biology. 2016 ; Vol. 17, No. 1.

BibTeX

@article{5a539fbc27ff444d9e1d5abab921e7fd,
title = "Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly",
abstract = "{\textcopyright} 2016 The Author(s).Background: There are three main dietary groups in mammals: carnivores, omnivores, and herbivores. Currently, there is limited comparative genomics insight into the evolution of dietary specializations in mammals. Due to recent advances in sequencing technologies, we were able to perform in-depth whole genome analyses of representatives of these three dietary groups. Results: We investigated the evolution of carnivory by comparing 18 representative genomes from across Mammalia with carnivorous, omnivorous, and herbivorous dietary specializations, focusing on Felidae (domestic cat, tiger, lion, cheetah, and leopard), Hominidae, and Bovidae genomes. We generated a new high-quality leopard genome assembly, as well as two wild Amur leopard whole genomes. In addition to a clear contraction in gene families for starch and sucrose metabolism, the carnivore genomes showed evidence of shared evolutionary adaptations in genes associated with diet, muscle strength, agility, and other traits responsi",
author = "S. Kim and Y.S. Cho and H.-M. Kim and O. Chung and H. Kim and S. Jho and H. Seomun and J. Kim and W.Y. Bang and C. Kim and J. An and C.H. Bae and Y. Bhak and S. Jeon and H. Yoon and Y. Kim and J.H. Jun and H.J. Lee and S. Cho and O. Uphyrkina and A. Kostyria and J. Goodrich and D. Miquelle and M. Roelke and J. Lewis and A. Yurchenko and A. Bankevich and J. Cho and S. Lee and J.S. Edwards and J.A. Weber and J. Cook and H. Lee and A. Manica and I. Lee and S.J. O'Brien and J. Bhak and J.-H. Yeo",
year = "2016",
doi = "10.1186/s13059-016-1071-4",
language = "English",
volume = "17",
journal = "Genome Biology",
issn = "1474-7596",
publisher = "BioMed Central Ltd.",
number = "1",

}

RIS

TY - JOUR

T1 - Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly

AU - Kim, S.

AU - Cho, Y.S.

AU - Kim, H.-M.

AU - Chung, O.

AU - Kim, H.

AU - Jho, S.

AU - Seomun, H.

AU - Kim, J.

AU - Bang, W.Y.

AU - Kim, C.

AU - An, J.

AU - Bae, C.H.

AU - Bhak, Y.

AU - Jeon, S.

AU - Yoon, H.

AU - Kim, Y.

AU - Jun, J.H.

AU - Lee, H.J.

AU - Cho, S.

AU - Uphyrkina, O.

AU - Kostyria, A.

AU - Goodrich, J.

AU - Miquelle, D.

AU - Roelke, M.

AU - Lewis, J.

AU - Yurchenko, A.

AU - Bankevich, A.

AU - Cho, J.

AU - Lee, S.

AU - Edwards, J.S.

AU - Weber, J.A.

AU - Cook, J.

AU - Lee, H.

AU - Manica, A.

AU - Lee, I.

AU - O'Brien, S.J.

AU - Bhak, J.

AU - Yeo, J.-H.

PY - 2016

Y1 - 2016

N2 - © 2016 The Author(s).Background: There are three main dietary groups in mammals: carnivores, omnivores, and herbivores. Currently, there is limited comparative genomics insight into the evolution of dietary specializations in mammals. Due to recent advances in sequencing technologies, we were able to perform in-depth whole genome analyses of representatives of these three dietary groups. Results: We investigated the evolution of carnivory by comparing 18 representative genomes from across Mammalia with carnivorous, omnivorous, and herbivorous dietary specializations, focusing on Felidae (domestic cat, tiger, lion, cheetah, and leopard), Hominidae, and Bovidae genomes. We generated a new high-quality leopard genome assembly, as well as two wild Amur leopard whole genomes. In addition to a clear contraction in gene families for starch and sucrose metabolism, the carnivore genomes showed evidence of shared evolutionary adaptations in genes associated with diet, muscle strength, agility, and other traits responsi

AB - © 2016 The Author(s).Background: There are three main dietary groups in mammals: carnivores, omnivores, and herbivores. Currently, there is limited comparative genomics insight into the evolution of dietary specializations in mammals. Due to recent advances in sequencing technologies, we were able to perform in-depth whole genome analyses of representatives of these three dietary groups. Results: We investigated the evolution of carnivory by comparing 18 representative genomes from across Mammalia with carnivorous, omnivorous, and herbivorous dietary specializations, focusing on Felidae (domestic cat, tiger, lion, cheetah, and leopard), Hominidae, and Bovidae genomes. We generated a new high-quality leopard genome assembly, as well as two wild Amur leopard whole genomes. In addition to a clear contraction in gene families for starch and sucrose metabolism, the carnivore genomes showed evidence of shared evolutionary adaptations in genes associated with diet, muscle strength, agility, and other traits responsi

U2 - 10.1186/s13059-016-1071-4

DO - 10.1186/s13059-016-1071-4

M3 - Article

VL - 17

JO - Genome Biology

JF - Genome Biology

SN - 1474-7596

IS - 1

ER -

ID: 7951914