Emission spectra of quantum dot arrays in zero-dimensional microcavities are studied theoretically. It is shown that their form is determined by the competition between collective superradiant mode formation and inhomogeneous broadening. A random sources method is used to calculate the photoluminescence spectra from an nonresonant pumped microcavity, and a standard diagram technique is used to provide a microscopic justification for the random sources method. The emission spectra of a microcavity are analyzed taking into account the spread of exciton energy due to inhomogeneous distribution of quantum dots and tunneling between them. It is demonstrated that the luminescence spectra of strongly tunnel-coupled quantum dots are sensitive to the dot positions, and the collective mode can (under certain conditions) be stabilized by random tunneling links.