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Amber 2021 : Reference Manual. / Case, David A.; Aktulga, H. Metin; Belfon, Kellon; Ben-Shalom, Ido; Brozell, Scott R.; Cerutti, David; Cheatham, Thomas; Cruzeiro, Vinícius Wilian D.; Darden, Tom; Duke, Robert E.; Giambasu, George; Gilson, Mike; Gohlke, Holger; Götz, Andreas; Harris, Robert; Izadi, Saeed; Измайлов, Сергей Александрович; Jin, Chi; Kasavajhala, Koushik; Kaymak, Mehmet Cagri ; King, Edward; Kovalenko, Andriy; Kurtzman, Tom; Lee, Taisung; LeGrand, Scott; Li, Pengfei; Lin, Charles; Liu, Jian; Luchko, Tyler; Luo, Ray; Machado, Matias; Man, Viet; Manathunga, Madushanka; Merz, Kenneth; Miao, Yinglong; Михайловский, Олег Владимирович; Monard, Gérald; Nguyen, Hai; O’Hearn, Kurt A.; Onufriev, Alexey; Pan, Feng; Pantano, Sergio; Qi, Ruxi; Rahnamoun, Ali; Roe, Daniel R.; Roitberg, Adrian; Sagui, Celeste; Schott-Verdugo, Stephan; Shen, Jana; Simmerling, Carlos; Скрынников, Николай Русланович; Smith, Jamie; Swails, Jason; Walker, Ross; Wang, Junmei; Wei, Haixin; Wolf, Romain M.; Wu, Xiongwu; Xue, Yi; York, Darrin; Zhao, Shiji; Kollman, Peter A.

San Francisco : University of California Press, 2021.

Research output: Working paper

Harvard

Case, DA, Aktulga, HM, Belfon, K, Ben-Shalom, I, Brozell, SR, Cerutti, D, Cheatham, T, Cruzeiro, VWD, Darden, T, Duke, RE, Giambasu, G, Gilson, M, Gohlke, H, Götz, A, Harris, R, Izadi, S, Измайлов, СА, Jin, C, Kasavajhala, K, Kaymak, MC, King, E, Kovalenko, A, Kurtzman, T, Lee, T, LeGrand, S, Li, P, Lin, C, Liu, J, Luchko, T, Luo, R, Machado, M, Man, V, Manathunga, M, Merz, K, Miao, Y, Михайловский, ОВ, Monard, G, Nguyen, H, O’Hearn, KA, Onufriev, A, Pan, F, Pantano, S, Qi, R, Rahnamoun, A, Roe, DR, Roitberg, A, Sagui, C, Schott-Verdugo, S, Shen, J, Simmerling, C, Скрынников, НР, Smith, J, Swails, J, Walker, R, Wang, J, Wei, H, Wolf, RM, Wu, X, Xue, Y, York, D, Zhao, S & Kollman, PA 2021 'Amber 2021: Reference Manual' University of California Press, San Francisco. <https://ambermd.org/doc12/Amber21.pdf>

APA

Case, D. A., Aktulga, H. M., Belfon, K., Ben-Shalom, I., Brozell, S. R., Cerutti, D., Cheatham, T., Cruzeiro, V. W. D., Darden, T., Duke, R. E., Giambasu, G., Gilson, M., Gohlke, H., Götz, A., Harris, R., Izadi, S., Измайлов, С. А., Jin, C., Kasavajhala, K., ... Kollman, P. A. (2021). Amber 2021: Reference Manual. University of California Press. https://ambermd.org/doc12/Amber21.pdf

Vancouver

Case DA, Aktulga HM, Belfon K, Ben-Shalom I, Brozell SR, Cerutti D et al. Amber 2021: Reference Manual. San Francisco: University of California Press. 2021 Jun 13.

Author

Case, David A. ; Aktulga, H. Metin ; Belfon, Kellon ; Ben-Shalom, Ido ; Brozell, Scott R. ; Cerutti, David ; Cheatham, Thomas ; Cruzeiro, Vinícius Wilian D. ; Darden, Tom ; Duke, Robert E. ; Giambasu, George ; Gilson, Mike ; Gohlke, Holger ; Götz, Andreas ; Harris, Robert ; Izadi, Saeed ; Измайлов, Сергей Александрович ; Jin, Chi ; Kasavajhala, Koushik ; Kaymak, Mehmet Cagri ; King, Edward ; Kovalenko, Andriy ; Kurtzman, Tom ; Lee, Taisung ; LeGrand, Scott ; Li, Pengfei ; Lin, Charles ; Liu, Jian ; Luchko, Tyler ; Luo, Ray ; Machado, Matias ; Man, Viet ; Manathunga, Madushanka ; Merz, Kenneth ; Miao, Yinglong ; Михайловский, Олег Владимирович ; Monard, Gérald ; Nguyen, Hai ; O’Hearn, Kurt A. ; Onufriev, Alexey ; Pan, Feng ; Pantano, Sergio ; Qi, Ruxi ; Rahnamoun, Ali ; Roe, Daniel R. ; Roitberg, Adrian ; Sagui, Celeste ; Schott-Verdugo, Stephan ; Shen, Jana ; Simmerling, Carlos ; Скрынников, Николай Русланович ; Smith, Jamie ; Swails, Jason ; Walker, Ross ; Wang, Junmei ; Wei, Haixin ; Wolf, Romain M. ; Wu, Xiongwu ; Xue, Yi ; York, Darrin ; Zhao, Shiji ; Kollman, Peter A. / Amber 2021 : Reference Manual. San Francisco : University of California Press, 2021.

BibTeX

@techreport{697db6ba0a10459f82ba7d7659d802d9,
title = "Amber 2021: Reference Manual",
author = "Case, {David A.} and Aktulga, {H. Metin} and Kellon Belfon and Ido Ben-Shalom and Brozell, {Scott R.} and David Cerutti and Thomas Cheatham and Cruzeiro, {Vin{\'i}cius Wilian D.} and Tom Darden and Duke, {Robert E.} and George Giambasu and Mike Gilson and Holger Gohlke and Andreas G{\"o}tz and Robert Harris and Saeed Izadi and Измайлов, {Сергей Александрович} and Chi Jin and Koushik Kasavajhala and Kaymak, {Mehmet Cagri} and Edward King and Andriy Kovalenko and Tom Kurtzman and Taisung Lee and Scott LeGrand and Pengfei Li and Charles Lin and Jian Liu and Tyler Luchko and Ray Luo and Matias Machado and Viet Man and Madushanka Manathunga and Kenneth Merz and Yinglong Miao and Михайловский, {Олег Владимирович} and G{\'e}rald Monard and Hai Nguyen and O{\textquoteright}Hearn, {Kurt A.} and Alexey Onufriev and Feng Pan and Sergio Pantano and Ruxi Qi and Ali Rahnamoun and Roe, {Daniel R.} and Adrian Roitberg and Celeste Sagui and Stephan Schott-Verdugo and Jana Shen and Carlos Simmerling and Скрынников, {Николай Русланович} and Jamie Smith and Jason Swails and Ross Walker and Junmei Wang and Haixin Wei and Wolf, {Romain M.} and Xiongwu Wu and Yi Xue and Darrin York and Shiji Zhao and Kollman, {Peter A.}",
year = "2021",
month = jun,
day = "13",
language = "English",
publisher = "University of California Press",
address = "United States",
type = "WorkingPaper",
institution = "University of California Press",

}

RIS

TY - UNPB

T1 - Amber 2021

T2 - Reference Manual

AU - Case, David A.

AU - Aktulga, H. Metin

AU - Belfon, Kellon

AU - Ben-Shalom, Ido

AU - Brozell, Scott R.

AU - Cerutti, David

AU - Cheatham, Thomas

AU - Cruzeiro, Vinícius Wilian D.

AU - Darden, Tom

AU - Duke, Robert E.

AU - Giambasu, George

AU - Gilson, Mike

AU - Gohlke, Holger

AU - Götz, Andreas

AU - Harris, Robert

AU - Izadi, Saeed

AU - Измайлов, Сергей Александрович

AU - Jin, Chi

AU - Kasavajhala, Koushik

AU - Kaymak, Mehmet Cagri

AU - King, Edward

AU - Kovalenko, Andriy

AU - Kurtzman, Tom

AU - Lee, Taisung

AU - LeGrand, Scott

AU - Li, Pengfei

AU - Lin, Charles

AU - Liu, Jian

AU - Luchko, Tyler

AU - Luo, Ray

AU - Machado, Matias

AU - Man, Viet

AU - Manathunga, Madushanka

AU - Merz, Kenneth

AU - Miao, Yinglong

AU - Михайловский, Олег Владимирович

AU - Monard, Gérald

AU - Nguyen, Hai

AU - O’Hearn, Kurt A.

AU - Onufriev, Alexey

AU - Pan, Feng

AU - Pantano, Sergio

AU - Qi, Ruxi

AU - Rahnamoun, Ali

AU - Roe, Daniel R.

AU - Roitberg, Adrian

AU - Sagui, Celeste

AU - Schott-Verdugo, Stephan

AU - Shen, Jana

AU - Simmerling, Carlos

AU - Скрынников, Николай Русланович

AU - Smith, Jamie

AU - Swails, Jason

AU - Walker, Ross

AU - Wang, Junmei

AU - Wei, Haixin

AU - Wolf, Romain M.

AU - Wu, Xiongwu

AU - Xue, Yi

AU - York, Darrin

AU - Zhao, Shiji

AU - Kollman, Peter A.

PY - 2021/6/13

Y1 - 2021/6/13

M3 - Working paper

BT - Amber 2021

PB - University of California Press

CY - San Francisco

ER -

ID: 84967962