1. 2009
  2. Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T)

    Chovatia, M., Sikorski, J., Schröder, M., Lapidus, A., Nolan, M., Tice, H., del Rio, T. G., Copeland, A., Cheng, J. F., Lucas, S., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., Land, M. & 16 others, Hauser, L., Chang, Y. J., Jeffries, C. D., Chain, P., Saunders, E., Detter, J. C., Brettin, T., Rohde, M., Göker, M., Spring, S., Bristow, J., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P. & Eisen, J. A., 2009, In: Standards in Genomic Sciences. 1, 3, p. 254-261 8 p.

    Research output: Contribution to journalArticlepeer-review

  3. Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii

    Mavromatis, K., Ivanova, N., Anderson, I., Lykidis, A., Hooper, S. D., Sun, H., Kunin, V., Hugenholtz, P., Patel, B. & Kyrpides, N. C., 2009, In: PLoS ONE.

    Research output: Contribution to journalArticle

  4. Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation.

    Salinero, KK., Keller, K., Feil, WS., Feil, H., Trong, S., Di Bartolo, G. & Lapidus, A., 2009, In: BMC Genomics.

    Research output: Contribution to journalArticle

  5. The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota.

    Anderson, IJ., Dharmarajan, L., Rodriguez, J., Hooper, S., Porat, I., Ulrich, LE., Elkins, JG., Mavromatis, K., Sun, H., Land, M., Lapidus, A., Lucas, S., Barry, K., Huber, H., Zhulin, IB., Whitman, WB., Mukhopadhyay, B., Woese, C., Bristow, J. & Kyrpides, N., 2009, In: BMC Genomics.

    Research output: Contribution to journalArticle

  6. The genome sequence of Geobacter metallireducens: Features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens

    Aklujkar, M., Krushkal, J., Dibartolo, G., Lapidus, A., Land, M. L. & Lovley, D. R., 2009, In: BMC Microbiology. 9, 109.

    Research output: Contribution to journalArticlepeer-review

  7. 2008
  8. The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome

    Sela, D. A., Chapman, J., Adeuya, A., Kim, J. H., Chen, F., Whitehead, T. R., Lapidus, A., Rokhsar, D. S., Lebrilla, C. B., German, J. B., Price, N. P., Richardson, P. M. & Mills, D. A., 2 Dec 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 48, p. 18964-18969 6 p.

    Research output: Contribution to journalArticlepeer-review

  9. A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

    Podar, M., Anderson, I., Makarova, K. S., Elkins, J. G., Wall, M. A., Lykidis, A., Mavromatis, K., Sun, H., Hudson, M. E., Chen, W., Deciu, C., Hutchison, D., Eads, J. R., Anderson, A., Fernandes, F., Szeto, E., Lapidus, A., Kyrpides, N. C., Saier, M. H., Richardson, P. M. & 6 others, Rachel, R., Huber, H., Eisen, J. A., Koonin, E. V., Keller, M. & Stetter, K. O., 10 Nov 2008, In: Genome Biology. 9, 11, R158.

    Research output: Contribution to journalArticlepeer-review

  10. High-resolution metagenomics targets specific functional types in complex microbial communities

    Kalyuzhnaya, M. G., Lapidus, A., Copeland, A. C., McHardy, A. C., Szeto, E., Salamov, A., Grigoriev, I. V., Suciu, D., Levine, S. R., Markowitz, V. M., Rigoutsos, I., Tringe, S. G., Bruce, D. C., Richardson, P. M., Lidstrom, M. E. & Chistoserdova, L., Sep 2008, In: Nature Biotechnology. 26, 9, p. 1029-1034 6 p.

    Research output: Contribution to journalArticlepeer-review

  11. A korarchaeal genome reveals insights into the evolution of the Archaea

    Elkins, J. G., Podar, M., Graham, D. E., Makarova, K. S., Wolf, Y., Randau, L., Hedlund, B. P., Brochier-Armanet, C., Kunin, V., Anderson, I., Lapidus, A., Goltsman, E., Barry, K., Koonin, E. V., Hugenholtz, P., Kyrpides, N., Wanner, G., Richardson, P., Keller, M. & Stetter, K. O., 10 Jun 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 23, p. 8102-8107 6 p.

    Research output: Contribution to journalArticlepeer-review

  12. Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction

    Anderson, I., Rodriguez, J., Susanti, D., Porat, I., Reich, C., Ulrich, L. E., Elkins, J. G., Mavromatis, K., Lykidis, A., Kim, E., Thompson, L. S., Nolan, M., Land, M., Copeland, A., Lapidus, A., Lucas, S., Detter, C., Zhulin, I. B., Olsen, G. J., Whitman, W. & 3 others, Mukhopadhyay, B., Bristow, J. & Kyrpides, N., Apr 2008, In: Journal of Bacteriology. 190, 8, p. 2957-2965 9 p.

    Research output: Contribution to journalArticlepeer-review

ID: 209717