Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria

K. Kleigrewe, J. Almaliti, I.Y. Tian, R.B. Kinnel, A. Korobeynikov, E.A. Monroe, B.M. Duggan, V. Di Marzo, D.H. Sherman, P.C. Dorrestein, L. Gerwick, W.H. Gerwick

Результат исследований: Научные публикации в периодических изданияхстатья

69 Цитирования (Scopus)

Выдержка

© 2015 The American Chemical Society and American Society of Pharmacognosy. An innovative approach was developed for the discovery of new natural products by combining mass spectrometric metabolic profiling with genomic analysis and resulted in the discovery of the columbamides, a new class of di- and trichlorinated acyl amides with cannabinomimetic activity. Three species of cultured marine cyanobacteria, Moorea producens 3L, Moorea producens JHB, and Moorea bouillonii PNG, were subjected to genome sequencing and analysis for their recognizable biosynthetic pathways, and this information was then compared with their respective metabolomes as detected by MS profiling. By genome analysis, a presumed regulatory domain was identified upstream of several previously described biosynthetic gene clusters in two of these cyanobacteria, M. producens 3L and M. producens JHB. A similar regulatory domain was identified in the M. bouillonii PNG genome, and a corresponding downstream biosynthetic gene cluster was located a
Язык оригиналаанглийский
Страницы (с-по)1671-1682
ЖурналJournal of Natural Products
Том78
Номер выпуска7
DOI
СостояниеОпубликовано - 2015

Отпечаток

Cyanobacteria
Biological Products
Genes
Genome
Multigene Family
Metabolome
Biosynthetic Pathways
Amides

Цитировать

Kleigrewe, K. ; Almaliti, J. ; Tian, I.Y. ; Kinnel, R.B. ; Korobeynikov, A. ; Monroe, E.A. ; Duggan, B.M. ; Di Marzo, V. ; Sherman, D.H. ; Dorrestein, P.C. ; Gerwick, L. ; Gerwick, W.H. / Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria. В: Journal of Natural Products. 2015 ; Том 78, № 7. стр. 1671-1682.
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title = "Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria",
abstract = "{\circledC} 2015 The American Chemical Society and American Society of Pharmacognosy. An innovative approach was developed for the discovery of new natural products by combining mass spectrometric metabolic profiling with genomic analysis and resulted in the discovery of the columbamides, a new class of di- and trichlorinated acyl amides with cannabinomimetic activity. Three species of cultured marine cyanobacteria, Moorea producens 3L, Moorea producens JHB, and Moorea bouillonii PNG, were subjected to genome sequencing and analysis for their recognizable biosynthetic pathways, and this information was then compared with their respective metabolomes as detected by MS profiling. By genome analysis, a presumed regulatory domain was identified upstream of several previously described biosynthetic gene clusters in two of these cyanobacteria, M. producens 3L and M. producens JHB. A similar regulatory domain was identified in the M. bouillonii PNG genome, and a corresponding downstream biosynthetic gene cluster was located a",
author = "K. Kleigrewe and J. Almaliti and I.Y. Tian and R.B. Kinnel and A. Korobeynikov and E.A. Monroe and B.M. Duggan and {Di Marzo}, V. and D.H. Sherman and P.C. Dorrestein and L. Gerwick and W.H. Gerwick",
year = "2015",
doi = "10.1021/acs.jnatprod.5b00301",
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Kleigrewe, K, Almaliti, J, Tian, IY, Kinnel, RB, Korobeynikov, A, Monroe, EA, Duggan, BM, Di Marzo, V, Sherman, DH, Dorrestein, PC, Gerwick, L & Gerwick, WH 2015, 'Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria', Journal of Natural Products, том. 78, № 7, стр. 1671-1682. https://doi.org/10.1021/acs.jnatprod.5b00301

Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria. / Kleigrewe, K.; Almaliti, J.; Tian, I.Y.; Kinnel, R.B.; Korobeynikov, A.; Monroe, E.A.; Duggan, B.M.; Di Marzo, V.; Sherman, D.H.; Dorrestein, P.C.; Gerwick, L.; Gerwick, W.H.

В: Journal of Natural Products, Том 78, № 7, 2015, стр. 1671-1682.

Результат исследований: Научные публикации в периодических изданияхстатья

TY - JOUR

T1 - Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria

AU - Kleigrewe, K.

AU - Almaliti, J.

AU - Tian, I.Y.

AU - Kinnel, R.B.

AU - Korobeynikov, A.

AU - Monroe, E.A.

AU - Duggan, B.M.

AU - Di Marzo, V.

AU - Sherman, D.H.

AU - Dorrestein, P.C.

AU - Gerwick, L.

AU - Gerwick, W.H.

PY - 2015

Y1 - 2015

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AB - © 2015 The American Chemical Society and American Society of Pharmacognosy. An innovative approach was developed for the discovery of new natural products by combining mass spectrometric metabolic profiling with genomic analysis and resulted in the discovery of the columbamides, a new class of di- and trichlorinated acyl amides with cannabinomimetic activity. Three species of cultured marine cyanobacteria, Moorea producens 3L, Moorea producens JHB, and Moorea bouillonii PNG, were subjected to genome sequencing and analysis for their recognizable biosynthetic pathways, and this information was then compared with their respective metabolomes as detected by MS profiling. By genome analysis, a presumed regulatory domain was identified upstream of several previously described biosynthetic gene clusters in two of these cyanobacteria, M. producens 3L and M. producens JHB. A similar regulatory domain was identified in the M. bouillonii PNG genome, and a corresponding downstream biosynthetic gene cluster was located a

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DO - 10.1021/acs.jnatprod.5b00301

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SP - 1671

EP - 1682

JO - Journal of Natural Products

JF - Journal of Natural Products

SN - 0163-3864

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