A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB

S.L. Cummings, D. Barbé, T.F. Leao, Anton Korobeynikov, N. Engene, E. Glukhov, W.H. Gerwick, L. Gerwick

Результат исследований: Научные публикации в периодических изданияхстатья

6 Цитирования (Scopus)

Выдержка

© 2016 The Author(s).Background: Filamentous tropical marine cyanobacteria such as Moorea producens strain JHB possess a rich community of heterotrophic bacteria on their polysaccharide sheaths; however, these bacterial communities have not yet been adequately studied or characterized. Results and discussion: Through efforts to sequence the genome of this cyanobacterial strain, the 5.99 MB genome of an unknown bacterium emerged from the metagenomic information, named here as Mor1. Analysis of its genome revealed that the bacterium is heterotrophic and belongs to the phylum Acidobacteria, subgroup 22; however, it is only 85 % identical to the nearest cultured representative. Comparative genomics further revealed that Mor1 has a large number of genes involved in transcriptional regulation, is completely devoid of transposases, is not able to synthesize the full complement of proteogenic amino acids and appears to lack genes for nitrate uptake. Mor1 was found to be present in lab cultures of M. producens collect
Язык оригиналаанглийский
ЖурналBMC Microbiology
Том16
Номер выпуска1
DOI
СостояниеОпубликовано - 2016

Отпечаток

Cyanobacteria
Genome
Bacteria
Acidobacteria
Transposases
Metagenomics
Genomics
Nitrates
Genes
Polysaccharides
Amino Acids

Цитировать

Cummings, S.L. ; Barbé, D. ; Leao, T.F. ; Korobeynikov, Anton ; Engene, N. ; Glukhov, E. ; Gerwick, W.H. ; Gerwick, L. / A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB. В: BMC Microbiology. 2016 ; Том 16, № 1.
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title = "A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB",
abstract = "{\circledC} 2016 The Author(s).Background: Filamentous tropical marine cyanobacteria such as Moorea producens strain JHB possess a rich community of heterotrophic bacteria on their polysaccharide sheaths; however, these bacterial communities have not yet been adequately studied or characterized. Results and discussion: Through efforts to sequence the genome of this cyanobacterial strain, the 5.99 MB genome of an unknown bacterium emerged from the metagenomic information, named here as Mor1. Analysis of its genome revealed that the bacterium is heterotrophic and belongs to the phylum Acidobacteria, subgroup 22; however, it is only 85 {\%} identical to the nearest cultured representative. Comparative genomics further revealed that Mor1 has a large number of genes involved in transcriptional regulation, is completely devoid of transposases, is not able to synthesize the full complement of proteogenic amino acids and appears to lack genes for nitrate uptake. Mor1 was found to be present in lab cultures of M. producens collect",
author = "S.L. Cummings and D. Barb{\'e} and T.F. Leao and Anton Korobeynikov and N. Engene and E. Glukhov and W.H. Gerwick and L. Gerwick",
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Cummings, SL, Barbé, D, Leao, TF, Korobeynikov, A, Engene, N, Glukhov, E, Gerwick, WH & Gerwick, L 2016, 'A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB', BMC Microbiology, том. 16, № 1. https://doi.org/10.1186/s12866-016-0817-1

A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB. / Cummings, S.L.; Barbé, D.; Leao, T.F.; Korobeynikov, Anton; Engene, N.; Glukhov, E.; Gerwick, W.H.; Gerwick, L.

В: BMC Microbiology, Том 16, № 1, 2016.

Результат исследований: Научные публикации в периодических изданияхстатья

TY - JOUR

T1 - A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB

AU - Cummings, S.L.

AU - Barbé, D.

AU - Leao, T.F.

AU - Korobeynikov, Anton

AU - Engene, N.

AU - Glukhov, E.

AU - Gerwick, W.H.

AU - Gerwick, L.

PY - 2016

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AB - © 2016 The Author(s).Background: Filamentous tropical marine cyanobacteria such as Moorea producens strain JHB possess a rich community of heterotrophic bacteria on their polysaccharide sheaths; however, these bacterial communities have not yet been adequately studied or characterized. Results and discussion: Through efforts to sequence the genome of this cyanobacterial strain, the 5.99 MB genome of an unknown bacterium emerged from the metagenomic information, named here as Mor1. Analysis of its genome revealed that the bacterium is heterotrophic and belongs to the phylum Acidobacteria, subgroup 22; however, it is only 85 % identical to the nearest cultured representative. Comparative genomics further revealed that Mor1 has a large number of genes involved in transcriptional regulation, is completely devoid of transposases, is not able to synthesize the full complement of proteogenic amino acids and appears to lack genes for nitrate uptake. Mor1 was found to be present in lab cultures of M. producens collect

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JO - BMC Microbiology

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SN - 1471-2180

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