IonHammer: Homopolymer-Space Hamming Clustering for IonTorrent Read Error Correction

Vasily Ershov, Артем Тарасов, Alla Lapidus, Anton Korobeynikov

Research outputpeer-review

1 Citation (Scopus)


We describe fast and accurate algorithm for IonTorrent read error correction capable of significantly reducing the number of sequencing errors over the wide range of data sets. IonHammer is implemented in C++ and is freely available as part of the SPAdes genome assembler package.

Original languageEnglish
Pages (from-to)124-127
Number of pages4
JournalJournal of Computational Biology
Issue number2
Early online date16 Oct 2018
Publication statusPublished - 1 Feb 2019

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