1. 2014
  2. GWATCH: a web platform for automated gene association discovery analysis

    Svitin, A., Malov, S., Cherkasov, N., Geerts, P., Rotkevich, M., Dobrynin, P., Shevchenko, A., Guan, L., Troyer, J., Hendrickson, S., Dilks, H. H., Oleksyk, T. K., Donfield, S., Gomperts, E., Jabs, D. A., Sezgin, E., Van Natta, M., Harrigan, P. R., Brumme, Z. L. & O'Brien, S. J., 2014, In: GigaScience. 3, 3, 10 p., 18.

    Research output: Contribution to journalArticlepeer-review

  3. Mammalian keratin associated proteins (KRTAPs) subgenomes: Disentangling hair diversity and adaptation to terrestrial and aquatic environments

    Khan, I., Maldonado, E., Vasconcelos, V., O'Brien, S. J., Johnson, W. E. & Antunes, A., 2014, In: BMC Genomics. 1

    Research output: Contribution to journalArticle

  4. Minke whale genome and aquatic adaptation in cetaceans

    Yim, H-S., Cho, Y. S., Guang, X., Kang, S. G., Jeong, J-Y., Cha, S-S., Oh, H-M., Lee, J-H., Yang, E. C., Kwon, K. K., Kim, Y. J., Kim, T. W., Kim, W., Jeon, J. H., Kim, S-J., Choi, D. H., Jho, S., Kim, H-M., Ko, J., Kim, H. & 34 others, Shin, Y-A., Jung, H-J., Zheng, Y., Wang, Z., Chen, Y., Chen, M., Jiang, A., Li, E., Zhang, S., Hou, H., Kim, T. H., Yu, L., Liu, S., Ahn, K., Cooper, J., Park, S-G., Hong, C. P., Jin, W., Kim, H-S., Park, C., Lee, K., Chun, S., Morin, P. A., O'Brien, S. J., Lee, H., Kimura, J., Moon, D. Y., Manica, A., Edwards, J., Kim, B. C., Kim, S., Wang, J., Bhak, J. & Lee, H. S., 2014, In: Nature Genetics. 46, 1, p. 88-92

    Research output: Contribution to journalArticle

  5. Phylogeography and population history of Leopardus guigna, the smallest American felid

    Napolitano, C., Johnson, W. E., Sanderson, J., O'Brien, S. J., Rus Hoelzel, A., Freer, R., Dunstone, N., Ritland, K., Ritland, C. E. & Poulin, E., 2014, In: Conservation Genetics. 3, p. 631-653

    Research output: Contribution to journalArticle

  6. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome

    Kuznetsova, IS., Thevasagayam, NM., Sridatta, PS., Komissarov, AS., Saju, JM., Ngoh, SY., Jiang, J., Shen, X. & Orbán, L., 2014, In: Frontiers in Genetics. 25, 5, p. (223) 1-14

    Research output: Contribution to journalArticle

  7. Sympatric Asian felid phylogeography reveals a major Indochinese-Sundaic divergence

    Luo, S-J., Zhang, Y., Johnson, W. E., Miao, L., Martelli, P., Antunes, A., Smith, J. L. D. & O'Brien, S. J., 2014, In: Molecular Ecology. 8, p. 2072-2092

    Research output: Contribution to journalArticle

  8. The dynamic proliferation of CanSINEs mirrors the complex evolution of Feliforms

    Walters-Conte, K. B., Johnson, D. L., Johnson, W. E., O'Brien, S. J. & Pecon-Slattery, J., 2014, In: BMC Evolutionary Biology. 1

    Research output: Contribution to journalArticle

  9. The Evolutionary Space Model to be Used for the Metagenomic Analysis of Molecular and Adaptive Evolution in the Bacterial Communities

    Pershina, E. V., Dolnik, A. S., Tamazyan, G. S., Vyatkina, K. V., Porozov, Y. B., Pinaev, A. G., Karimov, S. O., Provorov, N. A. & Andronov, E. E., 2014, Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life. Springer Nature, p. 339-355

    Research output: Chapter in Book/Report/Conference proceedingChapterResearch

  10. Whole-genome analyses resolve early branches in the tree of life of modern birds

    Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G. & 85 others, Boussau, B., Bayzid, M. S., Zavidovych, V., Subramanian, S., Gabaldón, T., Capella-Gutiérrez, S., Huerta-Cepas, J., Rekepalli, B., Munch, K., Schierup, M., Lindow, B., Warren, W. C., Ray, D., Green, R. E., Bruford, M. W., Zhan, X., Dixon, A., Li, S., Li, N., Huang, Y., Derryberry, E. P., Bertelsen, M. F., Sheldon, F. H., Brumfield, R. T., Mello, C. V., Lovell, P. V., Wirthlin, M., Schneider, M. P. C., Prosdocimi, F., Samaniego, J. A., Velazquez, A. M. V., Alfaro-N ñez, A., Campos, P. F., Petersen, B., Sicheritz-Ponten, T., Pas, A., Bailey, T., Scofield, P., Bunce, M., Lambert, D. M., Zhou, Q., Perelman, P., Driskell, A. C., Shapiro, B., Xiong, Z., Zeng, Y., Liu, S., Li, Z., Liu, B., Wu, K., Xiao, J., Yinqi, X., Zheng, Q., Zhang, Y., Yang, H., Wang, J., Smeds, L., Rheindt, F. E., Braun, M., Fjeldsa, J., Orlando, L., Barker, F. K., J nsson, K. A., Johnson, W., Koepfli, K-P., O'Brien, S., Haussler, D., Ryder, O. A., Rahbek, C., Willerslev, E., Graves, G. R., Glenn, T. C., McCormack, J., Burt, D., Ellegren, H., Alström, P., Edwards, S. V., Stamatakis, A., Mindell, D. P., Cracraft, J., Braun, E. L., Warnow, T., Jun, W., Gilbert, M. T. P. & Zhang, G., 2014, In: Science.. 6215, p. 1320-1331

    Research output: Contribution to journalArticlepeer-review

  11. Whole genome sequencing of Mycobacterium tuberculosis strains obtained from patients with pulmonary and extrapulmonary tuberculosis

    Chernyaeva, E., Rotkevich, M., Solovieva, N., Zhuravlev, V., Lapidus, A. & O'Brien, S., 2014, The International Journal of Tuberculosis and Lung Disease. S156

    Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

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