Научная лаборатория биомолекулярного ЯМР

Research Output 1989 2019

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2019
Open Access

Flexible surface model for lipid-protein interactions

Eitel, A. R., Fried, S. D. E., Perera, S. M. D. C., Weerasinghe, N., Norris, C. E., Struts, A. V. & Brown, M. F., 2019.

Research output

Histone tails in nucleosome: fuzzy interaction with DNA

Rabdano, S., Shannon, M., Izmailov, S., Gonzalez Salguero, N., Zandian, M., Poirier, M., Skrynnikov, N. & Jaroniec, C., 1 Jul 2019, In : European Biophysics Journal. 48, Suppl 1, p. 48

Research output

Peptide-protein conjugation in the context of targeted therapy: modeling and experiment

Rogacheva, O., Luzik, D., Indeykina, M., Kononikhin, A. & Skrynnikov, N., Jul 2019, In : FEBS Open Bio. 9, p. 212-212 1 p.

Research output

Quasielastic and elastic neutron scattering of membrane proteins

Perera, S. M. D. C., Chawla, U., Shrestha, U., Bhowmik, D., Struts, A. V., Qian, S., Chu, X-Q. & Brown, M. F., 2019.

Research output

Retinal Flipping During Rhodopsin Activation Revealed by Solid State H-2 NMR and QM/MM Simulations

Struts, A. V., Ryazantsev, M. N., Xu, X., Molugu, T. R., Perera, S. M. D. C., Guruge, C., Faylough, S., Nascimento, C. L., Nesnas, N. & Brown, M. F., 15 Feb 2019, In : Biophysical Journal. 116, 3, p. 204A-204A 1 p.

Research output

When molecular dynamics met NMR (and various other experimental methods)

Рогачева, О. Н., Измайлов, С. А., Лузик, Д. А., Рабдано, С. О., Подкорытов, И. С., Скрынников, Н. Р., Slipchenko, L. V., Индейкина, М., Cunningham, T., Hasanbasri, Z. & Saxena, S., 2019, p. 56-56. 1 p.

Research output

2018

A multinuclear NMR study of a thermotropic ionic liquid crystal.

Cifelli, M., Domenici, V. & Двинских, С. В., 16 Sep 2018.

Research output

Disulfide Bonds and how they Cause Protein Aggregation: Perspectives from NMR, Md Modeling and Cell Culture Experiments

Rabdano, S., Skrynnikov, N., Izmailov, S., Tyuryaeva, I., Luzik, D., Rogacheva, O., Lyublinskaya, O. & Podkorytov, I., 21 Nov 2018, In : Protein Science. 27, S1, p. 43

Research output

Dynamic modes revealed by MD simulations, experimental and computed EPR spectra in spin-labeled protein

Rabdano, S. O., Izmailov, S. A., Podkorytov, I. S., Cunningham, T., Jaroniec, C., Saxena, S. & Skrynnikov, N. R., 2018.

Research output

ESR spectra simulation form MD data using Redfield theory and direct propagation method

Измайлов, С. А., Рабдано, С. О., Подкорытов, И. С. & Скрынников, Н. Р., 2018, p. 73-73. 1 p.

Research output

ESR spectroscopy as a probe of protein dynamics: an insight from long MD simulations

Izmailov, S., Rabdano, S., Podkorytov, I., Cunningham, T., Jaroniec, C., Saxena, S. & Skrynnikov, N., Jul 2018, In : FEBS Open Bio. 8, p. 409-409 1 p.

Research output

Open Access

ESR spectroscopy as a probe of protein dynamics: the effect of different motional modes on the simulated lineshapes

Рабдано, С. О., Izmailov, S., Podkorytov, I., Cunningham, T., Jaroniec, C., Saxena, S. & Skrynnikov, N., 7 Jul 2018.

Research output

Insights to ESR spectra from molecular dynamics simulation

Измайлов, С. А., Скрынников, Н. Р., Подкорытов, И. С., Рабдано, С. О., Saxena, S., Jaroniec, C. & Cunningham, T., 2018, p. 265-265. 1 p.

Research output

Many faces of disulfide bond

Рабдано, С. О., Измайлов, С. А., Лузик, Д. А., Рогачева, О. Н., Тюряева, И. И., Люблинская, О., Подкорытов, И. С. & Скрынников, Н. Р., 2018, p. 48.

Research output

2017

Activation of GPCR Rhodopsin Investigated by Solid-State NMR Spectroscopy

Struts, A. V., Xu, X., Molugu, T. R., Pitman, M. C., Faylough, S., Guruge, C., Nascimento, C. L., Nesnas, N. & Brown, M. F., 3 Feb 2017, In : Biophysical Journal. 112, 3, p. 508A-508A 1 p.

Research output

Detection of flexible portion of protein chain in Sup35NM amyloid fibrils by means of diffusion-filtered NMR experiment

Подкорытов, И. С., Белоусов, М. В., Бондарев, С. А., Kämpf, K., Журавлева, Г. А., Двинских, С. В. & Скрынников, Н. Р., 10 Sep 2017, In : FEBS Journal. 284, Suppl. 1, p. 215

Research output

Open Access

Energy Landscape Model and Spatial Motion Models in Rhodopsin Activation

Perera, S. M. D. C., Chawla, U., Struts, A. V. & Brown, M. F., 3 Feb 2017, In : Biophysical Journal. 112, 3, p. 507A-508A 2 p.

Research output

Local and global dynamics of intrinsically disordered proteins: a case study of H4 histone tail

Kampf, K., Rabdano, S. O., Izmailov, S. A., Groves, A., Podkorytov, I. S. & Skrynnikov, N. R., Sep 2017, In : FEBS Journal. 284, p. 95-96 2 p.

Research output

Multiscale GPCR Activation in Lipid Membranes Probed by Solid-State NMR and Scattering Methods

Xu, X., Struts, A. V., Molugu, T. R., Perera, S. M. D. C., Chawla, U., Lee, S. K., Musharrafieh, R., Johnson, A. M., Huang, A., Knowles, T. A. & Brown, M. F., 3 Feb 2017, In : Biophysical Journal. 112, 3, p. 329A-329A 1 p.

Research output

New linear interaction between charged lysine side chain and carbonyl group in protein structures

Rogacheva, O., Izmailov, S., Слипченко, Л. & Skrynnikov, N., Sep 2017, In : FEBS Journal. 284, p. 311-312

Research output

Role of Soft Matter in G-Protein-Coupled Receptor Signaling

Chawla, U., Perera, S. M. D. C., Struts, A. V., Pitman, M. C. & Brown, M. F., 3 Feb 2017, In : Biophysical Journal. 112, 3, p. 391A-392A 2 p.

Research output

Time-Resolved Wide-Angle X-Ray Scattering Reveals Protein Quake in Rhodopsin Activation

Perera, S. M. D. C., Xu, X., Struts, A. V., Chawla, U., Boutet, S., Carbajo, S., Seaberg, M. D., Hunter, M. S., Martin-Garcia, J. M., Coe, J. D., Wiedorn, M. O., Nelson, G., Chamberlain, S., Deponte, D. P., Fromme, R., Grant, T. D., Kirian, R. A., Fromme, P. & Brown, M. F., 3 Feb 2017, In : Biophysical Journal. 112, 3, p. 506A-507A 2 p.

Research output

2016

Dynamics in Protein Crystals: Insights from MD Simulations Complement New Solid-State NMR and X-Ray Data.

Rogacheva, O. N., Izmailov, S. A., Kurauskas, V., Shilova, A., Ma, P., Xue, Y., Coquelle, N., Haller, J. D., Yuwen, T., Ayala, I., Hessel, A., Woodhouse, J., Mikhailovskii, O., Willbold, D., Colletier, J., Skrynnikov, N. R. & Schanda, P., 2016, In : FEBS Journal. 283, p. 237

Research output

Using molecular dynamics simulation and chemical shift prediction to unravel dynamics in different crystal forms of ubiquitin

Рогачева, О. Н., Измайлов, С. А., Kurauskas, V., Shilova, A., Ma, P., Xue, Y., Coquelle, N., Haller, J. D., Yuwen, T., Ayala, I., Hessel, A., Woodhouse, J., Mikhailovskii, O., Willbold, D., Colletier, J-P., Скрынников, Н. Р. & Schanda, P., 2016, p. 43.

Research output

2015

Destabilization of RNA-recognition motif RRM2 in proteinopathic protein TDP-43 under the effect of oxidative stress

Rabdano, S., Podkorytov, I., Yuwen, T., Groves, A., Chamberlain, K., Yakimov, A. & Skrynnikov, N., 2015.

Research output

2014

RNA‐recognition motif RRM2 in TDP‐43: oxidative stress leads to conformational change, proteolysis, formation of inclusion bodies, and neurodegenerative disease

Rabdano, S., Podkorytov, I., Yuwen, T., Groves, A., Chamberlain, K., Yakimov, A. & Skrynnikov, N., 10 Aug 2014, p. 27. 1 p.

Research output

1990

Metallic probe-point photoinduced in semiconductor

Бармасов, А. В., Резников, В. А. & Струц, А. В., 1990. 1 p.

Research output

The reduction of metal oxide powders yielded by electropulsed action

Бармасов, А. В., Резников, В. А. & Струц, А. В., 1990. 1 p.

Research output