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1 Citation (Scopus)

MGnify: the microbiome analysis resource in 2020

Mitchell, A. L., Almeida, A., Beracochea, M., Boland, M., Burgin, J., Cochrane, G., Crusoe, M. R., Kale, V., Potter, S. C., Richardson, L. J., Sakharova, E., Scheremetjew, M., Korobeynikov, A., Shlemov, A., Kunyavskaya, O., Lapidus, A. & Finn, R. D., 8 Jan 2020, In : Nucleic Acids Research. 48, D1, p. D570-D578 9 p.

Research output

Open Access
1 Citation (Scopus)
1 Citation (Scopus)
2019

BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs

Meleshko, D., Mohimani, H., Tracanna, V., Hajirasouliha, I., Medema, M. H., Korobeynikov, A. & Pevzner, P. A., 1 Aug 2019, In : Genome Research. 29, 8, p. 1352-1362

Research output

Open Access
4 Citations (Scopus)
Open Access

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

Cao, L., Gurevich, A., Alexander, K. L., Naman, C. B., Leão, T., Glukhov, E., Luzzatto-Knaan, T., Vargas, F., Quinn, R., Bouslimani, A., Nothias, L. F., Singh, N. K., Sanders, J. G., Benitez, R. A. S., Thompson, L. R., Hamid, M. N., Morton, J. T., Mikheenko, A., Shlemov, A., Korobeynikov, A. & 8 others, Friedberg, I., Knight, R., Venkateswaran, K., Gerwick, W. H., Gerwick, L., Dorrestein, P. C., Pevzner, P. A. & Mohimani, H., 18 Dec 2019, In : Cell Systems. 9, 6, p. 600-608.e4 13 p.

Research output

4 Citations (Scopus)

Monte Carlo Method for Solving ODE Systems

Ermakov, S. M. & Tovstik, T. M., 2019, Vestnik St. Petersburg University: Mathematics, 52, 3, p. 272-280.

Research output

Open Access

Noise model estimation with application to gene expression

Zhornikova, P., Golyandina, N. & Spirov, A., 1 Apr 2019, In : Journal of Bioinformatics and Computational Biology. 17, 2, 20 p., 1950009.

Research output

On solving stochastic differential equations

Ermakov, S. M. & Pogosian, A. A., 1 Jun 2019, In : Monte Carlo Methods and Applications. 25, 2, p. 155-161 7 p.

Research output

Open Access
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2 Citations (Scopus)
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2018
2 Citations (Scopus)

Autoprobiotics as an Approach for Restoration of Personalised Microbiota

Суворов, А. Н., Карасева, А. Б., Котылева, М. П., Кондратенко, Ю. Д., Лавренова, Н., Коробейников, А. И., Козырев, П. А., Крамская, Т. А., Леонтьева, Г., Кудрявцев, И. В., Guo, D., Лапидус, А. Л. & Ермоленко, Е. И., 12 Sep 2018, In : Frontiers in Microbiology. 9, 1869.

Research output

Open Access
4 Citations (Scopus)
2 Citations (Scopus)

Dereplication of microbial metabolites through database search of mass spectra

Mohimani, H., Гуревич, А. А., Шлемов, А. Ю., Михеенко, А. А., Коробейников, А. И., Cao, L., Щербин, Е., Nothias, L-F., Dorrestein, P. C. & Певзнер, П. А., 1 Dec 2018, In : Nature Communications. 9, 1, 12 p., 4035.

Research output

Open Access
35 Citations (Scopus)

Excess of locally D-optimal designs for Cobb–Douglas model

Шпилев, П. В., Мелас, В. Б. & Григорьев, Ю. Д., Dec 2018, In : Statistical Papers. Volume 59, Issue 4, p. 1425-1439 15 p.

Research output

1 Citation (Scopus)
26 Citations (Scopus)

Ketoreductase domain dysfunction expands chemodiversity: malyngamide biosynthesis in the cyanobacterium Okeania hirsuta

Moss, N., Leao, T., Rankin, M., McCullough, T. M., Qu, P., Коробейников, А. И., Smith, J. L., Gerwick, L. & Gerwick, W. H., 16 Nov 2018, In : ACS Chemical Biology.

Research output

Open Access
3 Citations (Scopus)

Optimal discrimination designs for semiparametric models

Мелас, В. Б., Гученко, Р. А., Dette, H. & Wong, W. K., 2018, In : Biometrika. 105, 1, p. 185-197 13 p.

Research output

2 Citations (Scopus)

Performance of global random search algorithms for large dimensions

Pepelyshev, A., Zhigljavsky, A. & Žilinskas, A., 1 May 2018, In : Journal of Global Optimization. 71, 1, p. 57-71 15 p.

Research output

9 Citations (Scopus)